Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94152 | Soybean | cytosol, plasma membrane, plastid | 71.88 | 71.43 |
| Solyc03g117000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 67.5 | 67.5 |
| Os01t0219100-01 | Rice | cytosol, peroxisome, plasma membrane | 69.38 | 66.87 |
| EES02242 | Sorghum | cytosol, peroxisome, plasma membrane | 68.12 | 65.66 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 66.25 | 64.63 |
| Bra009740.1-P | Field mustard | plasma membrane | 64.38 | 63.19 |
| CDX80421 | Canola | plasma membrane | 64.38 | 63.19 |
| CDX88083 | Canola | plasma membrane | 64.38 | 63.19 |
| GSMUA_Achr7P14100_001 | Banana | cytosol | 64.38 | 63.19 |
| AT5G24170.1 | Thale cress | plasma membrane | 63.75 | 62.58 |
| TraesCS3A01G143900.1 | Wheat | plasma membrane | 63.75 | 61.82 |
| TraesCS3D01G152300.1 | Wheat | plasma membrane | 63.75 | 61.82 |
| TraesCS3B01G170500.1 | Wheat | plasma membrane | 63.12 | 61.21 |
| PGSC0003DMT400036613 | Potato | cytosol, nucleus, plasma membrane | 37.5 | 55.56 |
| VIT_07s0130g00230.t01 | Wine grape | cytosol | 57.5 | 51.98 |
| CDY29688 | Canola | extracellular, plasma membrane, vacuole | 39.38 | 48.46 |
Protein Annotations
| EntrezGene:100258855 | wikigene:100258855 | MapMan:35.2 | ProteinID:CBI23143 | ProteinID:CBI23143.3 | UniProt:E0CVI2 |
| EMBL:FN595247 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016192 | EntrezGene:LOC100258855 | wikigene:LOC100258855 | PFAM:PF04178 | PANTHER:PTHR23137 |
| PANTHER:PTHR23137:SF14 | TMHMM:TMhelix | UniParc:UPI00019850D5 | ArrayExpress:VIT_16s0098g00310 | EnsemblPlantsGene:VIT_16s0098g00310 | EnsemblPlants:VIT_16s0098g00310.t01 |
| InterPro:Vesicle_transpt_Got1/SFT2 | InterPro:Vesicle_transpt_SFT2 | RefSeq:XP_002267997 | RefSeq:XP_002267997.1 | SEG:seg | : |
Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:E0CVI2]
Coordinates
chr16:-:20703884..20708576
Molecular Weight (calculated)
17873.4 Da
IEP (calculated)
5.050
GRAVY (calculated)
0.896
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MWNLGQSILG GNEEDREEYL EDSDGLCNLS PVQRMYGFAA CLVAGFACML LSLIVFAKPI KFAVLFTFGN LLAVGSTAFL IGPVQQIRMM FDPVRIYATA
101: IYIGFVVIAL ICALWIHNKI LTIIAIICEI CALIWYSLSY IPFARGMVSR LTVHFFDTEI
101: IYIGFVVIAL ICALWIHNKI LTIIAIICEI CALIWYSLSY IPFARGMVSR LTVHFFDTEI
001: MQKLNDIFSG GGDGDGTTDS FLEDGSEGLC ALSTTQRMYG FAASLATGLL LMFLSMIVFG IPIKFALLFT FGNVLAIGST AFLMGPEQQM SMMFDPVRFL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
101: ATSIYIGCVV VALICALLIH SKILTVLAIL CEICALIWYS LSYIPFARRM VSEIMIRLCD TEL
Arabidopsis Description
Vesicle transport protein [Source:UniProtKB/TrEMBL;Acc:Q6GKX4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.