Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G318300.1 | Wheat | cytosol | 99.49 | 99.49 |
| TraesCS3A01G284400.1 | Wheat | nucleus | 97.96 | 90.14 |
| Os01t0726400-01 | Rice | nucleus | 87.76 | 87.76 |
| KXG33296 | Sorghum | nucleus | 82.65 | 82.23 |
| Zm00001d011748_P001 | Maize | nucleus | 79.08 | 78.68 |
| HORVU3Hr1G068900.3 | Barley | nucleus, plastid | 97.96 | 65.53 |
| GSMUA_Achr9P05780_001 | Banana | nucleus | 65.82 | 60.28 |
| Zm00001d043589_P002 | Maize | plastid | 78.57 | 56.0 |
| TraesCS1D01G441200.1 | Wheat | nucleus | 30.61 | 31.58 |
| TraesCS3D01G090300.1 | Wheat | nucleus | 33.67 | 30.14 |
| TraesCS3D01G102700.1 | Wheat | nucleus | 35.2 | 30.13 |
| TraesCS7D01G380300.1 | Wheat | nucleus | 32.65 | 28.19 |
| TraesCS1D01G264500.1 | Wheat | nucleus | 30.1 | 27.06 |
| TraesCS3D01G401700.1 | Wheat | nucleus | 28.57 | 26.79 |
| TraesCS6D01G120900.1 | Wheat | nucleus | 32.14 | 26.36 |
| TraesCS6D01G147400.1 | Wheat | nucleus | 32.14 | 25.0 |
| TraesCS2D01G418800.2 | Wheat | nucleus | 32.14 | 23.25 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF214 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| EnsemblPlantsGene:TraesCS3D01G284200 | EnsemblPlants:TraesCS3D01G284200.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:393524723..393526703
Molecular Weight (calculated)
22331.9 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.544
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRSEIKR IDNPTQRQST FYKRRDGLFK KARELAVLCD ADLLLLLFSA SGKLYQYLAP TVPSVKEFVE RYEAATHTKV WSDIRQERRA ELEKVAKMCD
101: LLEKELRFMT VDDGEQYTVP SLAALEHNLE AAMHKVRSEK DRKIGGEMSY LENMIRGKQA ERYGLCDKLA HAQSLKVVEG GSTSLNNGLD LKLGFN
101: LLEKELRFMT VDDGEQYTVP SLAALEHNLE AAMHKVRSEK DRKIGGEMSY LENMIRGKQA ERYGLCDKLA HAQSLKVVEG GSTSLNNGLD LKLGFN
001: MGRGKIEIKR IENANNRVVT FSKRRNGLVK KAKEITVLCD AKVALIIFAS NGKMIDYCCP SMDLGAMLDQ YQKLSGKKLW DAKHENLSNE IDRIKKENDS
101: LQLELRHLKG EDIQSLNLKN LMAVEHAIEH GLDKVRDHQV CIHFYIHSYT
101: LQLELRHLKG EDIQSLNLKN LMAVEHAIEH GLDKVRDHQV CIHFYIHSYT
Arabidopsis Description
PIFloral homeotic protein PISTILLATA [Source:UniProtKB/Swiss-Prot;Acc:P48007]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.