Factsheet for Zm00001d043589_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011748_P001	Maize	nucleus	63.27	88.32
KXG33296	Sorghum	nucleus	63.27	88.32
Os01t0726400-01	Rice	nucleus	56.73	79.59
TraesCS3D01G284200.1	Wheat	nucleus	56.0	78.57
TraesCS3B01G318300.1	Wheat	cytosol	55.64	78.06
TraesCS3A01G284400.1	Wheat	nucleus	54.55	70.42
HORVU3Hr1G068900.3	Barley	nucleus, plastid	64.36	60.41
GSMUA_Achr9P05780_001	Banana	nucleus	42.91	55.14
Zm00001d018587_P001	Maize	nucleus	18.18	29.59
Zm00001d036425_P002	Maize	nucleus	23.64	28.63
Zm00001d010232_P001	Maize	nucleus	21.09	27.36
Zm00001d015381_P001	Maize	nucleus	25.82	27.31
Zm00001d042618_P001	Maize	nucleus	20.36	24.89
Zm00001d003168_P001	Maize	nucleus	21.09	24.07
Zm00001d018767_P001	Maize	nucleus	21.82	23.53
Zm00001d010233_P004	Maize	nucleus	20.73	22.27
Zm00001d041587_P001	Maize	nucleus	10.55	21.48
Zm00001d020114_P001	Maize	nucleus	17.45	21.33
Zm00001d033701_P001	Maize	nucleus	18.55	21.07
Zm00001d031591_P001	Maize	nucleus	20.73	19.66
Zm00001d047742_P001	Maize	nucleus	21.82	17.6

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A1D6NDG4	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487
InterPro:IPR036879	ProteinID:ONM38528.1	ProteinID:ONM38530.1	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404
ScanProsite:PS00350	PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF214	SMART:SM00432
SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000843BF03	EnsemblPlantsGene:Zm00001d043589
EnsemblPlants:Zm00001d043589_P002	EnsemblPlants:Zm00001d043589_T002	SEG:seg	:	:	:

Description

MADS-transcription factor 36Floral homeotic protein APETALA 3

Coordinates

chr3:+:204487153..204491765

Molecular Weight (calculated)

30691.3 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.688

Length

275 amino acids

Sequence
(BLAST)

001: MSRYCVNEQS STRPHPASAG SWHGSTPAGS SPSNLKQATT GKEQLGGGCC SAARLRVRDD DMGRGRSEIK RIENPTQRQS TFYKRRDGLF KKARELAVLC
101: DVDLLLLLFS GSGKLYHYLS PTVPTVKDLV ERYEAATHSK VWADVRQERR AELEKAERMC ELMEKELRFM TVDDGEQYTV PSLELLEHSL EAAVHRVRSE
201: KDRKIGGEID CLQNIIRGRH EERYGLCDKS LKSVQNFLQI WPQLAHSQAW NNGGEGGGST PPSGGGGLEL KLGFN

Best Arabidopsis Sequence Match ( AT5G60910.1 )
(BLAST)

001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE

Arabidopsis Description

AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.