Factsheet for Os01t0726400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G284200.1	Wheat	nucleus	87.76	87.76
TraesCS3B01G318300.1	Wheat	cytosol	87.24	87.24
KXG33296	Sorghum	nucleus	82.14	81.73
Zm00001d011748_P001	Maize	nucleus	81.12	80.71
TraesCS3A01G284400.1	Wheat	nucleus	86.73	79.81
GSMUA_Achr9P05780_001	Banana	nucleus	64.29	58.88
HORVU3Hr1G068900.3	Barley	nucleus, plastid	87.24	58.36
Zm00001d043589_P002	Maize	plastid	79.59	56.73
Os04t0614100-00	Rice	nucleus	29.08	32.02
Os06t0712700-01	Rice	nucleus	33.67	29.46
Os06t0667200-01	Rice	nucleus	32.65	28.96
Os05t0423400-01	Rice	nucleus	30.1	27.44
Os01t0883100-01	Rice	nucleus	29.08	27.27
Os02t0170300-01	Rice	nucleus	33.67	25.38

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EntrezGene:4324731	EMBL:AY177699	ProteinID:BAB90072.1	ProteinID:BAF06033.1
ProteinID:BAS74129.1	ncoils:Coil	GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487
InterPro:IPR036879	EnsemblPlantsGene:Os01g0726400	EnsemblPlants:Os01t0726400-01	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404
ScanProsite:PS00350	PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF214	UniProt:Q8S151
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI00000A4168
RefSeq:XP_015642650.1	SEG:seg	:	:	:	:

Description

MADS BOX GENE 32MADS box transcription factor, Regulation of floral organ identity (Os01t0726400-01)

Coordinates

chr1:-:30278399..30280577

Molecular Weight (calculated)

22533.1 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.560

Length

196 amino acids

Sequence
(BLAST)

001: MGRGRSEIKR IENPTQRQST FYKRRDGLFK KARELAVLCD ADLLLLLFSA SGKLYHFLSP TVPSVREFVE RYEATTHTKV WADIRQERRA ELEKVGSMCD
101: LLEKQLRFMT VDDGEEYTVP SLEALEHNLE AAMRKVRSEK DRKIGGEICY LQNIIRGRQE ERYGLCDKIA HAQTLKDVEC GSTSLSNGLD LKLGFN

Best Arabidopsis Sequence Match ( AT5G60910.1 )
(BLAST)

001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE

Arabidopsis Description

AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.