Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041587_P001 | Maize | nucleus | 48.0 | 80.0 |
| Zm00001d003168_P001 | Maize | nucleus | 64.44 | 60.17 |
| Zm00001d018767_P001 | Maize | nucleus | 64.0 | 56.47 |
| Zm00001d018587_P001 | Maize | nucleus | 40.89 | 54.44 |
| OQU82318 | Sorghum | nucleus | 60.44 | 52.92 |
| TraesCS2B01G440900.1 | Wheat | nucleus | 45.78 | 40.71 |
| Os04t0614100-00 | Rice | nucleus | 32.0 | 40.45 |
| Zm00001d033701_P001 | Maize | nucleus | 41.33 | 38.43 |
| TraesCS2D01G418800.2 | Wheat | nucleus | 45.33 | 37.64 |
| TraesCS2A01G422400.2 | Wheat | nucleus | 45.33 | 37.5 |
| HORVU2Hr1G098930.3 | Barley | nucleus | 45.33 | 36.96 |
| GSMUA_Achr3P23580_001 | Banana | nucleus | 34.22 | 31.95 |
| GSMUA_Achr2P02660_001 | Banana | nucleus | 32.44 | 30.42 |
| Zm00001d031591_P001 | Maize | nucleus | 38.22 | 29.66 |
| Zm00001d015381_P001 | Maize | nucleus | 33.33 | 28.85 |
| VIT_10s0042g00820.t01 | Wine grape | nucleus | 30.22 | 28.81 |
| VIT_02s0025g02350.t01 | Wine grape | nucleus | 25.78 | 28.16 |
| VIT_01s0011g01560.t01 | Wine grape | nucleus | 27.56 | 27.68 |
| Zm00001d047742_P001 | Maize | nucleus | 39.56 | 26.1 |
| CDX87180 | Canola | nucleus | 28.0 | 25.71 |
| Zm00001d010232_P001 | Maize | nucleus | 24.0 | 25.47 |
| CDY40800 | Canola | nucleus | 27.11 | 25.21 |
| CDY69354 | Canola | nucleus | 26.67 | 24.79 |
| Bra029365.1-P | Field mustard | nucleus | 26.67 | 24.79 |
| Solyc11g005120.1.1 | Tomato | nucleus | 26.22 | 24.79 |
| Bra013028.1-P | Field mustard | nucleus | 26.22 | 24.58 |
| CDY02217 | Canola | nucleus | 26.22 | 24.58 |
| CDY45758 | Canola | nucleus | 26.22 | 24.38 |
| Zm00001d036425_P002 | Maize | nucleus | 24.0 | 23.79 |
| KRH40895 | Soybean | nucleus | 25.78 | 23.77 |
| KRG89112 | Soybean | nucleus | 25.78 | 23.67 |
| AT5G23260.4 | Thale cress | nucleus | 27.56 | 23.13 |
| Zm00001d011748_P001 | Maize | nucleus | 20.0 | 22.84 |
| Zm00001d042618_P001 | Maize | nucleus | 22.67 | 22.67 |
| Zm00001d010233_P004 | Maize | nucleus | 23.11 | 20.31 |
| Bra026507.1-P | Field mustard | nucleus | 27.11 | 19.49 |
| CDY16841 | Canola | nucleus | 27.11 | 19.18 |
| Zm00001d043589_P002 | Maize | plastid | 21.33 | 17.45 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1D6I275 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | ProteinID:ONM54298.1 | PFAM:PF00319 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF210 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0008429942 | EnsemblPlantsGene:Zm00001d020114 | EnsemblPlants:Zm00001d020114_P001 | EnsemblPlants:Zm00001d020114_T001 | SEG:seg | : |
Description
No Description!
Coordinates
chr7:-:93596088..93598541
Molecular Weight (calculated)
25201.5 Da
IEP (calculated)
10.600
GRAVY (calculated)
-0.313
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKVELKK IENPTNRQVT FSKRRMGLFK KANELAILCD AQIRVIIFSG SGRMYEYSSP PWRIASVFDR YLKALAPVSR RWTSSSKSYS TSSCSRSAKG
101: YTTFQPPIRR LEMHMPAEQG GYLCLMNLAA ATASGQHQQA GEMMGINPRP FLWWDVGASG SGSQSQQLLH GRDAAESSMM VLGLSPQMHR FALVVGVRPQ
201: QDETTLNVQL LLLRYVHSRV FDHVS
101: YTTFQPPIRR LEMHMPAEQG GYLCLMNLAA ATASGQHQQA GEMMGINPRP FLWWDVGASG SGSQSQQLLH GRDAAESSMM VLGLSPQMHR FALVVGVRPQ
201: QDETTLNVQL LLLRYVHSRV FDHVS
001: MGRGKIEIKR IENANNRVVT FSKRRNGLVK KAKEITVLCD AKVALIIFAS NGKMIDYCCP SMDLGAMLDQ YQKLSGKKLW DAKHENLSNE IDRIKKENDS
101: LQLELRHLKG EDIQSLNLKN LMAVEHAIEH GLDKVRDHQV CIHFYIHSYT
101: LQLELRHLKG EDIQSLNLKN LMAVEHAIEH GLDKVRDHQV CIHFYIHSYT
Arabidopsis Description
PIFloral homeotic protein PISTILLATA [Source:UniProtKB/Swiss-Prot;Acc:P48007]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.