Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029365.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY40800 | Canola | nucleus | 96.69 | 96.69 |
| CDY45758 | Canola | nucleus | 82.64 | 82.64 |
| CDY02217 | Canola | nucleus | 81.41 | 82.08 |
| CDX87180 | Canola | nucleus | 76.03 | 75.1 |
| AT5G23260.4 | Thale cress | nucleus | 78.1 | 70.52 |
| CDY16841 | Canola | nucleus | 76.86 | 58.49 |
| VIT_10s0042g00820.t01 | Wine grape | nucleus | 51.65 | 52.97 |
| VIT_01s0011g01560.t01 | Wine grape | nucleus | 46.69 | 50.45 |
| KRG89112 | Soybean | nucleus | 48.35 | 47.76 |
| KRH40895 | Soybean | nucleus | 47.93 | 47.54 |
| Solyc11g005120.1.1 | Tomato | nucleus | 46.69 | 47.48 |
| GSMUA_Achr3P23580_001 | Banana | nucleus | 43.39 | 43.57 |
| VIT_02s0025g02350.t01 | Wine grape | nucleus | 35.54 | 41.75 |
| GSMUA_Achr2P02660_001 | Banana | nucleus | 40.91 | 41.25 |
| Os04t0614100-00 | Rice | nucleus | 28.93 | 39.33 |
| Zm00001d018587_P001 | Maize | nucleus | 26.45 | 37.87 |
| CDY35823 | Canola | nucleus | 23.97 | 37.66 |
| CDY45099 | Canola | nucleus | 31.41 | 37.44 |
| CDX92479 | Canola | nucleus | 23.55 | 37.01 |
| CDY60377 | Canola | nucleus | 30.17 | 35.96 |
| CDX88846 | Canola | nucleus | 30.17 | 35.96 |
| Zm00001d015381_P001 | Maize | nucleus | 38.43 | 35.77 |
| EES06346 | Sorghum | nucleus | 38.02 | 35.66 |
| TraesCS6D01G147400.1 | Wheat | nucleus | 36.78 | 35.32 |
| TraesCS6A01G158100.1 | Wheat | nucleus | 36.78 | 35.32 |
| Os06t0667200-01 | Rice | nucleus | 32.23 | 35.29 |
| TraesCS6B01G186700.1 | Wheat | nucleus | 36.78 | 35.18 |
| HORVU6Hr1G032220.7 | Barley | nucleus | 37.6 | 35.0 |
| Os02t0170300-01 | Rice | nucleus | 36.78 | 34.23 |
| CDY69833 | Canola | nucleus | 24.79 | 33.9 |
| TraesCS2B01G440900.1 | Wheat | nucleus | 35.12 | 33.6 |
| OQU82318 | Sorghum | nucleus | 35.12 | 33.07 |
| TraesCS3D01G090300.1 | Wheat | nucleus | 29.34 | 32.42 |
| TraesCS3D01G102700.1 | Wheat | nucleus | 30.58 | 32.31 |
| Zm00001d018767_P001 | Maize | nucleus | 33.88 | 32.16 |
| Zm00001d003168_P001 | Maize | nucleus | 31.82 | 31.95 |
| HORVU2Hr1G098930.3 | Barley | nucleus | 35.54 | 31.16 |
| TraesCS1D01G441200.1 | Wheat | nucleus | 24.38 | 31.05 |
| TraesCS2D01G418800.2 | Wheat | nucleus | 34.71 | 31.0 |
| KXG20558 | Sorghum | nucleus | 30.58 | 30.96 |
| TraesCS2A01G422400.2 | Wheat | nucleus | 34.71 | 30.88 |
| TraesCS3A01G090900.1 | Wheat | nucleus | 28.93 | 30.84 |
| TraesCS3A01G090300.1 | Wheat | nucleus | 28.51 | 30.67 |
| Zm00001d041587_P001 | Maize | nucleus | 16.94 | 30.37 |
| TraesCS3B01G105700.2 | Wheat | nucleus | 28.1 | 29.96 |
| TraesCS7A01G475000.1 | Wheat | nucleus | 27.27 | 29.33 |
| CDX73487 | Canola | nucleus | 27.69 | 28.88 |
| CDX76152 | Canola | nucleus | 26.45 | 28.57 |
| CDY13200 | Canola | nucleus | 26.03 | 28.12 |
| Zm00001d033701_P001 | Maize | nucleus | 28.1 | 28.1 |
| Zm00001d020114_P001 | Maize | nucleus | 24.79 | 26.67 |
| HORVU7Hr1G108280.4 | Barley | nucleus, plastid | 28.93 | 26.22 |
| HORVU7Hr1G108410.1 | Barley | nucleus | 22.73 | 25.23 |
| TraesCS7B01G377700.1 | Wheat | nucleus | 23.55 | 25.22 |
| Zm00001d031591_P001 | Maize | nucleus | 30.17 | 25.17 |
| Zm00001d047742_P001 | Maize | nucleus | 30.58 | 21.7 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078JRD5 | UniProt:A0A078JRD5 | EnsemblPlants:CDY69354 | ProteinID:CDY69354 |
| ProteinID:CDY69354.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | GO:GO:0048316 | EnsemblPlantsGene:GSBRNA2T00087024001 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | PFscan:PS50066 | PFscan:PS51297 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF257 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | InterPro:TT16-like | UniParc:UPI000254560F | : | : | : |
Description
BnaAnng30140DBnaAnng30140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRD5]
Coordinates
chrLK039229:+:1426..3871
Molecular Weight (calculated)
28440.0 Da
IEP (calculated)
8.044
GRAVY (calculated)
-0.863
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGKIEIKK IENRTARQVT FSKRRSGVIK KAHELSVLCD AHIGLIVFSA TGKLYQHCTE PLTMPQLIDR YLQTNGLRLP DPNDNREEFC HEIEVLRRET
101: CKLELRQRLY RGHGLASIPP HELDGLEQQL EHSVLKIRQR KNELMQQQLE NLSRKRRMLE DDNNNMYRWL HGHRATTEFQ QGGIETKPGE YQQFLEQVQF
201: YNDQQQQPNS FLQLATHPSE IDLNYHLHLA QPNLQNDPMA NI
101: CKLELRQRLY RGHGLASIPP HELDGLEQQL EHSVLKIRQR KNELMQQQLE NLSRKRRMLE DDNNNMYRWL HGHRATTEFQ QGGIETKPGE YQQFLEQVQF
201: YNDQQQQPNS FLQLATHPSE IDLNYHLHLA QPNLQNDPMA NI
001: MNIEEEGATH KRKKREMGRG KIEIKKIENQ TARQVTFSKR RTGLIKKTRE LSILCDAHIG LIVFSATGKL SEFCSEQNRM PQLIDRYLHT NGLRLPDHHD
101: DQEQLHHEME LLRRETCNLE LRLRPFHGHD LASIPPNELD GLERQLEHSV LKVRERKNEL MQQQLENLSR KRRMLEEDNN NMYRWLHEHR AAMEFQQAGI
201: DTKPGEYQQF IEQLQCYKPG EYQQFLEQQQ QQPNSVLQLA TLPSEIDPTY NLQLAQPNLQ NDPTAQND
101: DQEQLHHEME LLRRETCNLE LRLRPFHGHD LASIPPNELD GLERQLEHSV LKVRERKNEL MQQQLENLSR KRRMLEEDNN NMYRWLHEHR AAMEFQQAGI
201: DTKPGEYQQF IEQLQCYKPG EYQQFLEQQQ QQPNSVLQLA TLPSEIDPTY NLQLAQPNLQ NDPTAQND
Arabidopsis Description
TT16K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT5G23260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.