Factsheet for HORVU7Hr1G108280.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G475000.1	Wheat	nucleus	65.17	77.33
HORVU7Hr1G108410.1	Barley	nucleus	56.18	68.81
GSMUA_Achr3P23580_001	Banana	nucleus	32.96	36.51
KXG20558	Sorghum	nucleus	31.84	35.56
Os06t0667200-01	Rice	nucleus	29.21	35.29
GSMUA_Achr2P02660_001	Banana	nucleus	31.46	35.0
HORVU6Hr1G032220.7	Barley	nucleus	33.33	34.23
CDY45758	Canola	nucleus	30.34	33.47
Bra013028.1-P	Field mustard	nucleus	29.96	33.33
CDY02217	Canola	nucleus	29.96	33.33
VIT_10s0042g00820.t01	Wine grape	nucleus	28.46	32.2
CDX87180	Canola	nucleus	29.21	31.84
VIT_01s0011g01560.t01	Wine grape	nucleus	25.84	30.8
HORVU2Hr1G098930.3	Barley	nucleus	31.46	30.43
VIT_02s0025g02350.t01	Wine grape	nucleus	23.22	30.1
CDY40800	Canola	nucleus	26.22	28.93
Bra029365.1-P	Field mustard	nucleus	26.22	28.93
CDY69354	Canola	nucleus	26.22	28.93
AT5G23260.4	Thale cress	nucleus	28.84	28.73
Solyc11g005120.1.1	Tomato	nucleus	25.09	28.15
KRH40895	Soybean	nucleus	24.72	27.05
KRG89112	Soybean	nucleus	24.34	26.53
CDY16841	Canola	nucleus	31.09	26.1
Bra026507.1-P	Field mustard	nucleus	30.34	25.88
HORVU3Hr1G091000.8	Barley	nucleus, plastid	25.84	25.27
HORVU1Hr1G063620.1	Barley	nucleus	20.6	24.66
HORVU7Hr1G091210.4	Barley	nucleus, plastid	19.48	21.85
HORVU3Hr1G068900.3	Barley	nucleus, plastid	23.6	21.5

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A287XRI4	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983	EnsemblPlantsGene:HORVU7Hr1G108280	EnsemblPlants:HORVU7Hr1G108280.4
InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404
PFscan:PS50066	PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF259	SMART:SM00432	SUPFAM:SSF55455
InterPro:TF_Kbox	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000B48668D	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:624930610..624933031

Molecular Weight (calculated)

30216.0 Da

IEP (calculated)

9.710

GRAVY (calculated)

-0.659

Length

267 amino acids

Sequence
(BLAST)

001: VTVPALARKE GTSSRRRRHW ALADRRVRSR SAARPLQGCR EKGRRRRMRR GSVEIRRIAN NVSRRATFGK RCAGLLKKAH ELAVLCDADL GVLVFDAAGR
101: QFHYCSPNAS WSELIQRYDS TTSDQFQGGQ GMNHDHDQLL SEIARLRQER DHLEAVVRSQ TGEDLPSTAS VPELGHLEQK LERALGKVRE MKDKLLEEQL
201: GESHHRVHIL EDQNSFLRHM MSEEGRQRAA VEASAVVAEL MAPATLLGGF FPEVEEEEAA TSLRLWP

Best Arabidopsis Sequence Match ( AT5G23260.4 )
(BLAST)

001: MNIEEEGATH KRKKREMGRG KIEIKKIENQ TARQVTFSKR RTGLIKKTRE LSILCDAHIG LIVFSATGKL SEFCSEQNRM PQLIDRYLHT NGLRLPDHHD
101: DQEQLHHEME LLRRETCNLE LRLRPFHGHD LASIPPNELD GLERQLEHSV LKVRERKNEL MQQQLENLSR KRRMLEEDNN NMYRWLHEHR AAMEFQQAGI
201: DTKPGEYQQF IEQLQCYKPG EYQQFLEQQQ QQPNSVLQLA TLPSEIDPTY NLQLAQPNLQ NDPTAQND

Arabidopsis Description

TT16K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT5G23260]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.