CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G441200.1	Wheat	nucleus	33.47	42.11
Os06t0667200-01	Rice	nucleus	38.91	42.08
TraesCS3D01G090300.1	Wheat	nucleus	37.66	41.1
GSMUA_Achr3P23580_001	Banana	nucleus	39.33	39.0
TraesCS3B01G105700.2	Wheat	nucleus	36.82	38.77
TraesCS7A01G475000.1	Wheat	nucleus	36.4	38.67
TraesCS3D01G102700.1	Wheat	nucleus	36.82	38.43
TraesCS3A01G090900.1	Wheat	nucleus	35.98	37.89
TraesCS3A01G090300.1	Wheat	nucleus	35.56	37.78
EES06346	Sorghum	nucleus	39.75	36.82
GSMUA_Achr2P02660_001	Banana	nucleus	36.82	36.67
VIT_01s0011g01560.t01	Wine grape	nucleus	34.31	36.61
VIT_10s0042g00820.t01	Wine grape	nucleus	35.15	35.59
KXG33296	Sorghum	nucleus	28.87	35.03
VIT_02s0025g02350.t01	Wine grape	nucleus	30.13	34.95
CDY45758	Canola	nucleus	34.31	33.88
Bra013028.1-P	Field mustard	nucleus	33.89	33.75
CDY02217	Canola	nucleus	33.89	33.75
Solyc11g005120.1.1	Tomato	nucleus	33.05	33.19
CDX87180	Canola	nucleus	33.47	32.65
TraesCS7B01G377700.1	Wheat	nucleus	30.54	32.3
HORVU7Hr1G108280.4	Barley	nucleus, plastid	35.56	31.84
EES18254	Sorghum	nucleus	28.03	31.6
EES01864	Sorghum	nucleus	27.62	31.58
CDY40800	Canola	nucleus	31.8	31.41
Bra029365.1-P	Field mustard	nucleus	30.96	30.58
CDY69354	Canola	nucleus	30.96	30.58
OQU82318	Sorghum	nucleus	32.64	30.35
HORVU7Hr1G108410.1	Barley	nucleus	27.62	30.28
KRH40895	Soybean	nucleus	30.54	29.92
KRG89112	Soybean	nucleus	29.71	28.98
EER90370	Sorghum	nucleus	27.2	28.76
AT5G23260.4	Thale cress	nucleus	30.96	27.61
CDY16841	Canola	nucleus	34.73	26.1
Bra026507.1-P	Field mustard	nucleus	33.47	25.56

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:A0A194YKS7	ncoils:Coil	GO:GO:0000977	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983
InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	EnsemblPlants:KXG20558	ProteinID:KXG20558	ProteinID:KXG20558.1
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	PFscan:PS50066	PFscan:PS51297
PANTHER:PTHR11945	PANTHER:PTHR11945:SF334	SMART:SM00432	EnsemblPlantsGene:SORBI_3010G221500	SUPFAM:SSF55455	InterPro:TF_Kbox
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0007F26A12	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:56416155..56418494

Molecular Weight (calculated)

26769.4 Da

IEP (calculated)

4.718

GRAVY (calculated)

-0.618

Length

239 amino acids

Sequence
(BLAST)

001: MGRGKVEMKR IENKVSRQVT FSKRRKGLLK KAEELAVLCD VDVGVIGFSE RGKLFDYSSP ASLDDLIHRY EAATNTQLYH QELHYTDHQE QQQQMAAKIS
101: KLQHEYQQLE ASLKTYTGED LSSLTSVAEL GELEQQLESA VGKVRARKDE LFINLTEELQ VKINENGRHD DDAAATAGVE AEETTMAEPL LPLPQSPSFA
201: YLLAVEEKSA ASTMLRLWPP TDEDADDGGS SSRRGLQLW

Best Arabidopsis Sequence Match ( AT1G26310.1 )
(BLAST)

001: MGRGRVELKR IENKINRQVT FSKRRTGLLK KAQEISVLCD AEVSLIVFSH KGKLFEYSSE SCMEKVLERY ERYSYAERQL IAPDSHVNAQ TNWSMEYSRL
101: KAKIELLERN QRHYLGEELE PMSLKDLQNL EQQLETALKH IRSRKNQLMN ESLNHLQRKE KEIQEENSML TKQIKERENI LRTKQTQCEQ LNRSVDDVPQ
201: PQPFQHPHLY MIAHQTSPFL NMGGLYQEED QTAMRRNNLD LTLEPIYNYL GCYAA

Arabidopsis Description

CALTranscription factor CAULIFLOWER [Source:UniProtKB/Swiss-Prot;Acc:Q39081]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.