Factsheet for TraesCS5A01G063900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G068600.1	Wheat	cytosol	98.45	98.67
TraesCS5D01G074900.1	Wheat	cytosol	98.0	98.22
Zm00001d041381_P001	Maize	cytosol, mitochondrion	70.07	66.95
OQU79483	Sorghum	cytosol, mitochondrion, nucleus	72.95	64.89
TraesCS4A01G242800.1	Wheat	plastid	66.08	63.95
Os12t0594000-00	Rice	cytosol, peroxisome, plastid	83.59	62.94
TraesCS4A01G242900.1	Wheat	plastid	66.74	62.06
HORVU5Hr1G017260.1	Barley	plastid	71.62	60.94
GSMUA_Achr7P08190_001	Banana	cytosol	40.8	55.76
GSMUA_Achr9P26470_001	Banana	nucleus	48.12	52.42
GSMUA_Achr9P09670_001	Banana	plastid	39.91	48.91
GSMUA_Achr2P17180_001	Banana	golgi	48.56	46.7
TraesCS5A01G379200.1	Wheat	cytosol	49.0	46.33
GSMUA_Achr6P34640_001	Banana	plastid	39.91	45.8
TraesCS3A01G485100.1	Wheat	plastid	32.37	35.1
TraesCS3A01G156000.1	Wheat	cytosol	31.71	28.26
TraesCS2A01G324000.1	Wheat	plastid	27.49	27.99
TraesCS7A01G195200.1	Wheat	cytosol	29.27	26.51

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF323	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS5A01G063900
EnsemblPlants:TraesCS5A01G063900.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:69140695..69142050

Molecular Weight (calculated)

48164.5 Da

IEP (calculated)

9.772

GRAVY (calculated)

-0.289

Length

451 amino acids

Sequence
(BLAST)

001: MRNHKKFLQF LRPDPAVAAA SDDGCSPLPS PTTTSGSAST SATASPSPYV ASPWVNLPGL GAGAALTAGA ADETGLLGSF VKEDGHVYSL AAAGDLLYTG
101: TDSKNVRVWR DRREFAGFQC GSGLVKAIVV AGDGRIYTGH QDGKIRVWRA SADDPAVHKR VGSLPKLGDF LRSSVRPSHY IETRRRHSSV WLRHFDAVSC
201: LSLDADAGLL YSGSWDRTFK VWRVSDSRCL ESVRAHDDAV NTVAAAGFDA LAFTGSADGT VKVWRREDGK GGATRHVMER VLRKGESAVT AIAVAAEARV
301: VYVASSDGAV THWQWRRGAD RESAPRNGGA LRGHKMAVLS LAVAGRVVVS GSADRTISVW RRDEGADHSR LAVLSGHTGP VKCVAMDEEE SVDADGHRRW
401: VVYSGSLDGS VKVWRVSDAP GAMTARTPAH VWKGTPSPLG AWTPYRAPER S

Best Arabidopsis Sequence Match ( AT1G49450.1 )
(BLAST)

001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S

Arabidopsis Description

F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.