Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34640_001 | Banana | plastid | 75.82 | 70.99 |
| GSMUA_Achr9P26470_001 | Banana | nucleus | 70.92 | 63.04 |
| GSMUA_Achr7P08190_001 | Banana | cytosol | 43.48 | 48.48 |
| GSMUA_Achr4P10690_001 | Banana | cytosol, endoplasmic reticulum, plastid | 45.11 | 44.5 |
| GSMUA_Achr3P30740_001 | Banana | cytosol | 39.95 | 42.0 |
| GSMUA_Achr6P20880_001 | Banana | cytosol | 44.29 | 41.58 |
| TraesCS5D01G074900.1 | Wheat | cytosol | 49.18 | 40.22 |
| TraesCS5B01G068600.1 | Wheat | cytosol | 48.91 | 40.0 |
| TraesCS4A01G242800.1 | Wheat | plastid | 50.54 | 39.91 |
| TraesCS5A01G063900.1 | Wheat | cytosol | 48.91 | 39.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.66 | 39.45 |
| TraesCS4B01G072300.1 | Wheat | plastid | 50.54 | 39.32 |
| TraesCS4B01G072200.1 | Wheat | plastid | 51.09 | 39.17 |
| TraesCS4A01G242900.1 | Wheat | plastid | 51.36 | 38.97 |
| TraesCS4D01G071000.1 | Wheat | plastid | 51.09 | 38.84 |
| TraesCS4D01G071100.1 | Wheat | plastid | 50.0 | 38.74 |
| TraesCS4B01G072100.1 | Wheat | plastid | 50.0 | 37.94 |
| GSMUA_Achr2P17180_001 | Banana | golgi | 48.1 | 37.74 |
| HORVU4Hr1G012000.11 | Barley | plastid | 48.91 | 37.5 |
| OQU91330 | Sorghum | mitochondrion | 50.27 | 37.3 |
| Zm00001d033304_P001 | Maize | mitochondrion, plastid | 48.37 | 37.01 |
| Zm00001d041381_P001 | Maize | cytosol, mitochondrion | 46.47 | 36.23 |
| OQU79483 | Sorghum | cytosol, mitochondrion, nucleus | 47.01 | 34.12 |
| Os03t0625300-00 | Rice | mitochondrion | 44.84 | 31.43 |
| GSMUA_Achr4P07470_001 | Banana | endoplasmic reticulum, plasma membrane | 42.12 | 31.12 |
| Os12t0594000-00 | Rice | cytosol, peroxisome, plastid | 49.18 | 30.22 |
| HORVU5Hr1G017260.1 | Barley | plastid | 40.76 | 28.3 |
| GSMUA_Achr11P... | Banana | cytosol | 28.26 | 27.96 |
| GSMUA_Achr4P03080_001 | Banana | mitochondrion, nucleus, peroxisome, plasma membrane | 44.84 | 25.78 |
| GSMUA_Achr6P36100_001 | Banana | cytosol | 26.09 | 24.43 |
| GSMUA_Achr9P07610_001 | Banana | nucleus | 26.36 | 23.83 |
| GSMUA_Achr7P19910_001 | Banana | cytosol | 27.17 | 22.73 |
| GSMUA_Achr3P17140_001 | Banana | cytosol | 26.63 | 22.07 |
| GSMUA_Achr10P... | Banana | nucleus | 27.45 | 21.49 |
| GSMUA_Achr8P28630_001 | Banana | cytosol | 25.0 | 17.9 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSMUA_Achr9G09670_001 | EnsemblPlants:GSMUA_Achr9P09670_001 | EnsemblPlants:GSMUA_Achr9T09670_001 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| UniProt:M0TYX6 | PFAM:PF00400 | PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22844 |
| PANTHER:PTHR22844:SF145 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000294C7EE | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
Putative WD repeat-containing protein 69 [Source:GMGC_GENE;Acc:GSMUA_Achr9G09670_001]
Coordinates
chr9:+:6277292..6278794
Molecular Weight (calculated)
38835.0 Da
IEP (calculated)
10.170
GRAVY (calculated)
-0.326
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDRKVSTGS PPRGSKLPGY YSDRNPTSTG ASPYFLSPWN PVAVSPLAKS PWAYLPLLSD EAADPSATGL VGSLGRRELS GFKSSSGLVK AIVVAGDRIF
101: TGHQDGKIRI WKTSSKNPAV HRRVGTLPRL KDLLKSSINP LDEEAGILYS GSWDKTVKVW RISDSKCLES IKAHDDAVNA VATGFGGLLF TGSADGTAKV
201: WRREAAGKGG ATRHVLVQML LRQESAVTSV AMSEAAGVVG SADKTLCVWR REATGGDGWD HTKLAVLAGH QGPIKCLAVE EEDDSQGGAV IAFPGGPRYV
301: VYSGSLDKSV KVWRVLEREA TAGATPVRGL AEAETRDGKL GRSPLRAGGG GAGAPTSDRA RGLPREHT
101: TGHQDGKIRI WKTSSKNPAV HRRVGTLPRL KDLLKSSINP LDEEAGILYS GSWDKTVKVW RISDSKCLES IKAHDDAVNA VATGFGGLLF TGSADGTAKV
201: WRREAAGKGG ATRHVLVQML LRQESAVTSV AMSEAAGVVG SADKTLCVWR REATGGDGWD HTKLAVLAGH QGPIKCLAVE EEDDSQGGAV IAFPGGPRYV
301: VYSGSLDKSV KVWRVLEREA TAGATPVRGL AEAETRDGKL GRSPLRAGGG GAGAPTSDRA RGLPREHT
001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S
Arabidopsis Description
F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.