Factsheet for HORVU5Hr1G017260.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G068600.1	Wheat	cytosol	61.32	72.22
TraesCS5A01G063900.1	Wheat	cytosol	60.94	71.62
TraesCS5D01G074900.1	Wheat	cytosol	60.75	71.56
Zm00001d041381_P001	Maize	cytosol, mitochondrion	45.09	50.64
OQU79483	Sorghum	cytosol, mitochondrion, nucleus	48.3	50.49
Os12t0594000-00	Rice	cytosol, peroxisome, plastid	56.42	49.92
HORVU4Hr1G012000.11	Barley	plastid	43.21	47.71
GSMUA_Achr7P08190_001	Banana	cytosol	28.68	46.06
GSMUA_Achr9P26470_001	Banana	nucleus	35.66	45.65
GSMUA_Achr2P17180_001	Banana	golgi	36.42	41.15
GSMUA_Achr9P09670_001	Banana	plastid	28.3	40.76
GSMUA_Achr6P34640_001	Banana	plastid	28.11	37.91
HORVU5Hr1G093830.1	Barley	cytosol	33.02	36.53
HORVU3Hr1G106030.1	Barley	plastid	21.89	26.61
HORVU7Hr1G039810.1	Barley	plastid	17.55	24.22
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	18.68	22.05
HORVU3Hr1G031720.2	Barley	cytosol	20.19	21.1

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A287QH08	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU5Hr1G017260	EnsemblPlants:HORVU5Hr1G017260.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF323	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000B479A4E	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:66534680..66537115

Molecular Weight (calculated)

56262.8 Da

IEP (calculated)

11.937

GRAVY (calculated)

-0.497

Length

530 amino acids

Sequence
(BLAST)

001: AENLSSSTNR QSVTLGSFLL PRSPPRFLTK EVILVRSLQG CTDSVLRWTA GGMRNHKKLL QFLRPDPAVA AANDDGCSPL PSPTTSGSAS TSATASPSPY
101: VASPWVSLPG LGAGAALSAG AADETGLLGS FVKEDGHVYS LAAAGDLLYT GTDSKNVRVW RDRREFAGFH CGSGLVKAIV VAGDGRIYTG HQDGKIRVWR
201: ASAGDPAVHR RVGSLPKLGD FLRSSVRPSH YIETRRRHSS VWLRHFDAVS CLSLDADAGL LYSGSWDRTF KVWRVSDSRC LESVHAHDDA VNTVAAAGFD
301: ALAFTGSADG TVKVWRREDG KGGATRHVME RVLRKGESAV TAIAVAAEAR VXXXXXXXXX RVRRLLGRGR HPLAVAARSR PGQRAEERRG ATRAQDGRAV
401: PRGGRARRRE RLRRPDHLRV AARRGRRPLP PRRAERAHGA GEVRGHGRGG VPRRGRPPAV GRVQRQPRRL RQSLARVRRA RRDDDADAGA RVEGHAVADG
501: RLDALPAAGA ELKNVERARV NRVSVGEPTL

Best Arabidopsis Sequence Match ( AT1G49450.1 )
(BLAST)

001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S

Arabidopsis Description

F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.