Factsheet for HORVU2Hr1G083090.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G338900.1	Wheat	plastid	92.2	93.67
TraesCS2A01G324000.1	Wheat	plastid	91.31	92.55
TraesCS2B01G358100.1	Wheat	plastid	91.98	92.39
Zm00001d025699_P001	Maize	plastid	74.39	73.89
Zm00001d003272_P001	Maize	cytosol, plastid	73.05	72.73
KXG26570	Sorghum	cytosol, plastid	75.72	72.19
Os04t0481600-00	Rice	cytosol	77.73	67.5
Bra032795.1-P	Field mustard	cytosol	32.07	46.6
GSMUA_Achr9P07610_001	Banana	nucleus	42.09	46.44
GSMUA_Achr3P17140_001	Banana	cytosol	43.65	44.14
HORVU7Hr1G039810.1	Barley	plastid	33.85	39.58
CDY24427	Canola	plastid	36.75	39.1
CDY36134	Canola	plastid	36.53	38.86
CDY51591	Canola	cytosol, mitochondrion	36.08	38.76
KRH57169	Soybean	cytosol, plasma membrane	29.4	38.71
Bra010967.1-P	Field mustard	cytosol, plastid	36.3	38.63
Bra012504.1-P	Field mustard	cytosol, mitochondrion	35.86	38.52
KRH43090	Soybean	plastid	36.75	38.28
CDY03879	Canola	cytosol, mitochondrion	35.63	38.28
CDX84954	Canola	plastid	35.86	38.15
AT1G24530.1	Thale cress	cytosol, plastid	35.41	38.04
GSMUA_Achr8P28630_001	Banana	cytosol	43.43	37.94
VIT_01s0137g00360.t01	Wine grape	cytosol	36.08	37.5
Solyc05g013880.1.1	Tomato	cytosol, plastid	34.97	36.94
CDY27587	Canola	plastid	35.63	36.78
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	32.07	36.0
PGSC0003DMT400043704	Potato	plastid	34.74	35.78
KRH03884	Soybean	cytosol	29.4	35.11
Solyc03g111780.1.1	Tomato	cytosol	27.84	31.17
HORVU3Hr1G106030.1	Barley	plastid	26.73	27.52
HORVU5Hr1G093830.1	Barley	cytosol	28.95	27.14
HORVU4Hr1G012000.11	Barley	plastid	28.06	26.25
HORVU3Hr1G031720.2	Barley	cytosol	23.39	20.71
HORVU5Hr1G017260.1	Barley	plastid	22.05	18.68

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:AK374368	UniProt:F2EDZ3	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
EnsemblPlantsGene:HORVU2Hr1G083090	EnsemblPlants:HORVU2Hr1G083090.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0002008E6E	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EDZ3]

Coordinates

chrchr2H:+:604171477..604173633

Molecular Weight (calculated)

46499.5 Da

IEP (calculated)

9.195

GRAVY (calculated)

-0.062

Length

449 amino acids

Sequence
(BLAST)

001: MKLLPRLCMA TSSSNAAAGD SDASSNKLGS GASTSSSTVS TSSSSAAAAA VSEASSSSTS LPSLSAAASN AASFAHVATL LPLPAAAPAA AAVAAVDASH
101: GFVVARPASV AFHDLCTLEA ASSSDPGDDT AAAGSVKCVA HVHGGKAVTG HQDGRLRLWR ASSRAPQRIR LAAALPTVSD RLRRFPVPSN HVAVRRHHRR
201: LWIEHADTVS GVAASADGRL LFSVSWDKTL KVWAIPSLRC LQSLPAHDDA VNAVAVAPDG TVYTGSADRR VRVWAPRPAS ESDKTTKRQS KKPVYYLLAT
301: LSRHTAAVNA VAVGCGGQVL YSGGNDRCVV VWEREDSASH MVAIGALRGH RKAVLAVACT GDGLVVSGSA DHTVRAWRRE TDRRGHTCVA VIDGHGSAVR
401: SVAVALVPGK QQLQAGGDDH DDGDEEWRVC SASFDGEVRV WSLRVTTGL

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.