Factsheet for Os04t0481600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G338900.1	Wheat	plastid	67.5	78.96
TraesCS2B01G358100.1	Wheat	plastid	67.5	78.08
TraesCS2A01G324000.1	Wheat	plastid	66.73	77.88
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	67.5	77.73
KXG26570	Sorghum	cytosol, plastid	70.79	77.71
Zm00001d025699_P001	Maize	plastid	66.34	75.89
Zm00001d003272_P001	Maize	cytosol, plastid	65.96	75.61
Bra032795.1-P	Field mustard	cytosol	28.05	46.93
GSMUA_Achr9P07610_001	Banana	nucleus	36.75	46.68
GSMUA_Achr3P17140_001	Banana	cytosol	39.07	45.5
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	30.95	40.1
Os02t0740900-01	Rice	plastid	31.53	40.05
KRH57169	Soybean	cytosol, plasma membrane	25.92	39.3
CDY51591	Canola	cytosol, mitochondrion	31.53	39.0
CDY03879	Canola	cytosol, mitochondrion	31.53	39.0
Bra012504.1-P	Field mustard	cytosol, mitochondrion	31.33	38.76
CDY24427	Canola	plastid	31.53	38.63
VIT_01s0137g00360.t01	Wine grape	cytosol	32.11	38.43
CDX84954	Canola	plastid	31.33	38.39
CDY36134	Canola	plastid	31.33	38.39
KRH43090	Soybean	plastid	31.91	38.28
Bra010967.1-P	Field mustard	cytosol, plastid	31.14	38.15
GSMUA_Achr8P28630_001	Banana	cytosol	37.91	38.13
AT1G24530.1	Thale cress	cytosol, plastid	30.37	37.56
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	28.82	37.25
CDY27587	Canola	plastid	31.14	37.01
Solyc05g013880.1.1	Tomato	cytosol, plastid	30.37	36.94
PGSC0003DMT400043704	Potato	plastid	29.98	35.55
KRH03884	Soybean	cytosol	25.73	35.37
Solyc03g111780.1.1	Tomato	cytosol	25.15	32.42
Os01t0946100-02	Rice	cytosol, plastid	24.37	29.23
Os03t0738700-01	Rice	plasma membrane	25.53	26.99
Os03t0625300-00	Rice	mitochondrion	24.18	23.81
Os12t0594000-00	Rice	cytosol, peroxisome, plastid	25.15	21.7
Os01t0232200-00	Rice	cytosol	20.31	20.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:4336188	UniProt:A0A0P0WBW4	ProteinID:BAS89747.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os04g0481600	EnsemblPlants:Os04t0481600-00	PFAM:PF00400
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000393945F	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_015634390.1
SEG:seg	:	:	:	:	:

Description

OsWD40-101WD-40 repeat containing protein. (Os04t0481600-00)

Coordinates

chr4:-:24086549..24088168

Molecular Weight (calculated)

53708.4 Da

IEP (calculated)

9.756

GRAVY (calculated)

-0.040

Length

517 amino acids

Sequence
(BLAST)

001: MCRTIPSRQM EEADPSLRVQ IPPPRTRTNS SIPRSRGRCH SGWWCLLMRL LPRLCMATGD SAAAAGEGDS SNSGSKQQAA AVSSSSSTVS TSSSAAAAAV
101: SEASSSMSLP SLPSLSDVTG SMSASLAASF AHVTTLCPLS TAAAAASAAA VAAADYSVHG GGGLVVVVAR PAAVVLHDVF TMEATSTSDM ADDTSAAGSV
201: KCVAHLHGGK AAVTGHQDGR LRLWRMSSRA PDRLRLAAAL PTVSDRLRRF PVPSNHVTVR RHHRRLWIEH ADAVSGVAAS ADGRLLFSVS WDKTLKVWAV
301: PSLRCLQSLP AHDDAVNAVA VAHDGTVYTA SADRRVRVWA PRAPAAGPDR ASRRPGKKPA YHLVATLSRH AAAVNAVAVG CGGQVLYSGG NDRCVVVWER
401: EDSASHMVAV GALRGHRRAV LSVACAAGDA ADGALVVSGA ADQTVRAWRR GADGRGYYCV AVIDGHGSAV RSVAAALVTA QKKRRADDDG GDEEWRVCSA
501: SFDGEVRLWS LRVAAAS

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.