Factsheet for Zm00001d025699_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26570	Sorghum	cytosol, plastid	86.5	83.01
Zm00001d003272_P001	Maize	cytosol, plastid	82.52	82.71
TraesCS2A01G324000.1	Wheat	plastid	73.45	74.94
TraesCS2D01G338900.1	Wheat	plastid	73.23	74.89
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	73.89	74.39
TraesCS2B01G358100.1	Wheat	plastid	73.23	74.05
Os04t0481600-00	Rice	cytosol	75.89	66.34
Bra032795.1-P	Field mustard	cytosol	33.19	48.54
GSMUA_Achr9P07610_001	Banana	nucleus	43.58	48.4
GSMUA_Achr3P17140_001	Banana	cytosol	44.47	45.27
Zm00001d017994_P001	Maize	cytosol	33.19	42.13
CDY24427	Canola	plastid	38.27	41.0
CDY51591	Canola	cytosol, mitochondrion	37.83	40.91
CDY03879	Canola	cytosol, mitochondrion	37.83	40.91
CDY36134	Canola	plastid	38.05	40.76
Bra012504.1-P	Field mustard	cytosol, mitochondrion	37.61	40.67
Bra010967.1-P	Field mustard	cytosol, plastid	37.83	40.52
CDX84954	Canola	plastid	37.39	40.05
AT1G24530.1	Thale cress	cytosol, plastid	36.73	39.71
KRH57169	Soybean	cytosol, plasma membrane	29.87	39.59
GSMUA_Achr8P28630_001	Banana	cytosol	44.69	39.3
VIT_01s0137g00360.t01	Wine grape	cytosol	37.39	39.12
KRH43090	Soybean	plastid	36.95	38.75
CDY27587	Canola	plastid	37.17	38.62
Solyc05g013880.1.1	Tomato	cytosol, plastid	34.73	36.94
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	32.52	36.75
PGSC0003DMT400043704	Potato	plastid	34.51	35.78
KRH03884	Soybean	cytosol	28.98	34.84
Solyc03g111780.1.1	Tomato	cytosol	27.88	31.42
Zm00001d042132_P001	Maize	plastid	26.33	29.6
Zm00001d033304_P001	Maize	mitochondrion, plastid	28.98	27.23
Zm00001d041381_P001	Maize	cytosol, mitochondrion	27.21	26.06
Zm00001d039292_P001	Maize	cytosol	25.44	21.54
Zm00001d009003_P001	Maize	cytosol	24.56	21.35

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	ProteinID:AQK44284.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7TLB1	PFAM:PF00400
PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0002213EF1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
EnsemblPlantsGene:Zm00001d025699	EnsemblPlants:Zm00001d025699_P001	EnsemblPlants:Zm00001d025699_T001	SEG:seg	:	:

Description

Nucleotide binding protein

Coordinates

chr10:-:126708804..126710162

Molecular Weight (calculated)

46036.6 Da

IEP (calculated)

11.182

GRAVY (calculated)

0.025

Length

452 amino acids

Sequence
(BLAST)

001: MKLLPRLCMA TGTGTGDGDG EGSASSSTKR ATAVSSSSST VSTSSAAAAA VSESSSSTSL PSLSSATSAS LAASFVHVAT LLPLSARPSP CAAVVAATGG
101: SLPGLVVARP SCVALHDLST LEATSTSDAA AGAGAGSVKC VARLPGGGGG GAAVTGHQDG RLRLWRVSSR SPGRIRLAAA LPTVSDRLRR FPVPSNHVAV
201: RRHHRRLWIE HADAVSGVAA SADGRLLFSV SWDKTLKVWA APSLRCLQSL AAHDDAVNAV AVAPDGTVYT GSADRRVRVW APRPRPRPAA RGKKQPVYHL
301: VATLSRHTAA VNALAVGRGG QALYSGGNDR CVLVWEREDS ASHMAAVGAL RGHRKAVLSV ACAPGGLVVS GSADQTVRAW RRAADGRGYA CVAVIDGHGT
401: AVRSVAAAPL PVLQKRSRAG GVDGGGGDEE WRVCSASFDG QVRVWSLRVS CL

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.