Factsheet for VIT_01s0137g00360.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032795.1-P	Field mustard	cytosol	48.38	67.64
CDY51591	Canola	cytosol, mitochondrion	58.33	60.29
Bra012504.1-P	Field mustard	cytosol, mitochondrion	58.1	60.05
CDY03879	Canola	cytosol, mitochondrion	58.1	60.05
AT1G24530.1	Thale cress	cytosol, plastid	58.1	60.05
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	55.32	59.75
CDY24427	Canola	plastid	57.64	59.0
Bra010967.1-P	Field mustard	cytosol, plastid	57.41	58.77
CDY36134	Canola	plastid	57.41	58.77
CDX84954	Canola	plastid	57.18	58.53
KRH43090	Soybean	plastid	58.33	58.47
Solyc05g013880.1.1	Tomato	cytosol, plastid	56.94	57.88
CDY27587	Canola	plastid	56.94	56.55
PGSC0003DMT400043704	Potato	plastid	56.71	56.19
GSMUA_Achr9P07610_001	Banana	nucleus	43.98	46.68
GSMUA_Achr3P17140_001	Banana	cytosol	46.53	45.27
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	42.36	45.07
VIT_01s0026g00880.t01	Wine grape	cytosol	43.29	43.79
GSMUA_Achr8P28630_001	Banana	cytosol	45.37	38.13
Zm00001d025699_P001	Maize	plastid	39.12	37.39
Zm00001d003272_P001	Maize	cytosol, plastid	38.89	37.25
TraesCS2D01G338900.1	Wheat	plastid	37.5	36.65
TraesCS2A01G324000.1	Wheat	plastid	37.27	36.34
KXG26570	Sorghum	cytosol, plastid	39.35	36.09
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	37.5	36.08
TraesCS2B01G358100.1	Wheat	plastid	37.04	35.79
VIT_13s0019g01680.t01	Wine grape	plastid	30.56	33.25
VIT_18s0001g11600.t01	Wine grape	nucleus	34.95	33.11
Os04t0481600-00	Rice	cytosol	38.43	32.11
VIT_03s0063g01790.t01	Wine grape	cytosol	32.64	31.69
VIT_07s0255g00110.t01	Wine grape	nucleus	34.72	30.12
VIT_04s0008g03540.t01	Wine grape	cytosol	27.55	26.56
VIT_09s0002g04040.t01	Wine grape	nucleus	24.77	23.88
VIT_09s0002g04050.t01	Wine grape	cytosol	23.61	22.77
VIT_09s0002g04060.t01	Wine grape	nucleus	27.08	12.33

Protein Annotations

EntrezGene:100249075	wikigene:100249075	Gene3D:2.130.10.10	MapMan:35.1	ProteinID:CCB44008	ProteinID:CCB44008.1
UniProt:F6GVP5	EMBL:FN594954	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	EntrezGene:LOC100249075	wikigene:LOC100249075	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0001982B3F
ArrayExpress:VIT_01s0137g00360	EnsemblPlantsGene:VIT_01s0137g00360	EnsemblPlants:VIT_01s0137g00360.t01	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	RefSeq:XP_002282147	RefSeq:XP_002282147.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:6886601..6888081

Molecular Weight (calculated)

46891.0 Da

IEP (calculated)

8.492

GRAVY (calculated)

-0.037

Length

432 amino acids

Sequence
(BLAST)

001: MRVRSCLPAW ISTADDSEIS LPEIQKSFPK LFASDNSRSP EMLGSLSTSG ETSCDSGLQS SLSLQTLPSV PSLQKLSPEA LNLSVSHLCV ATLKPRPVHI
101: NCLAVSADSL YAASGYQIHV FDLKNYAHLD AFNTDDSSSG SVKSLAFCDG KIFTSHQNGK IRVWQMTISK RHQLVATLPT VNDRLRHFML PKNYVSVRRH
201: KKRLWIDHAD AVSGLSVSDG FICSVSWDKC FKIWRASDLR CLESVKAHQD AVNAVAISGN GIIYTGSADC RIKVWAKASG EKRHTVVATL EKHKSAVNAL
301: ALTGDGSILF SGACDRSILV WEREDSANHM VVTGALRGHS KAILCLISVS DLLLSGSADR TVRIWQHGSD GRYCCLSVLE GHEKPVKALV AVSDGESKVA
401: GAIRVFSGSL DGEIKVWQVS VSSHYGPLTP IF

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.