Factsheet for Bra032795.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012504.1-P	Field mustard	cytosol, mitochondrion	91.91	67.94
CDY27587	Canola	plastid	95.47	67.82
Bra010967.1-P	Field mustard	cytosol, plastid	90.94	66.59
AT1G24530.1	Thale cress	cytosol, plastid	88.03	65.07
VIT_01s0137g00360.t01	Wine grape	cytosol	67.64	48.38
KRH43090	Soybean	plastid	65.37	46.87
Solyc05g013880.1.1	Tomato	cytosol, plastid	61.81	44.94
PGSC0003DMT400043704	Potato	plastid	61.49	43.58
GSMUA_Achr9P07610_001	Banana	nucleus	54.05	41.03
GSMUA_Achr3P17140_001	Banana	cytosol	55.34	38.51
Bra024637.1-P	Field mustard	plastid	50.81	38.48
Bra000611.1-P	Field mustard	nucleus	47.25	37.53
Bra015611.1-P	Field mustard	cytosol	41.1	34.99
Bra037545.1-P	Field mustard	cytosol	42.07	34.95
TraesCS2D01G338900.1	Wheat	plastid	47.9	33.48
Zm00001d025699_P001	Maize	plastid	48.54	33.19
Zm00001d003272_P001	Maize	cytosol, plastid	48.22	33.04
TraesCS2A01G324000.1	Wheat	plastid	46.93	32.73
TraesCS2B01G358100.1	Wheat	plastid	46.93	32.44
GSMUA_Achr8P28630_001	Banana	cytosol	53.72	32.3
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	46.6	32.07
KXG26570	Sorghum	cytosol, plastid	47.57	31.21
Bra006883.1-P	Field mustard	plastid	39.81	29.01
Bra033466.1-P	Field mustard	cytosol, plastid	39.81	29.01
Bra001728.1-P	Field mustard	nucleus	42.72	28.76
Bra034310.1-P	Field mustard	nucleus	41.75	28.73
Bra007751.1-P	Field mustard	nucleus	41.75	28.67
Bra022372.1-P	Field mustard	cytosol	42.07	28.38
Os04t0481600-00	Rice	cytosol	46.93	28.05
Bra014189.1-P	Field mustard	nucleus	42.07	27.84
Bra036080.1-P	Field mustard	cytosol	39.48	26.46
Bra012903.1-P	Field mustard	cytosol	39.48	26.29
Bra034622.1-P	Field mustard	cytosol	40.13	25.36
Bra011525.1-P	Field mustard	cytosol	38.84	25.05
Bra017646.1-P	Field mustard	cytosol	38.51	24.34

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EnsemblPlantsGene:Bra032795	EnsemblPlants:Bra032795.1	EnsemblPlants:Bra032795.1-P	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M4EVG2	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000254260A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT1G24530 (E=4e-133) | transducin family protein / WD-40 repeat family protein

Coordinates

chrA09:+:12738557..12739486

Molecular Weight (calculated)

34306.8 Da

IEP (calculated)

9.846

GRAVY (calculated)

-0.281

Length

309 amino acids

Sequence
(BLAST)

001: MCAHLDSFNG HDPFSGSVKS VGFSGDKIFT AHQDGKIGVW KLTAKNGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHRKCL WIEHADAVSA LAVNNGFIYS
101: VSWDKTLKIW RASDLRCKES IKAHDDAVNA VAVSANGTVY TGSADRRIRV WAKPADSKRH ELVATLEKHK SAVNALALND DGSVLFSGSC DRSILVWERE
201: DSSNYMTVRG ALRGHDKAIL SLFNVSDLLI SGSADRTVRI WRRGIDGRYR CLEVLSGHTK PVKWLAAVKD SESDGVVSIV SGSIDGEVKC WKVSVTKPDN
301: YSIYKDLVL

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.