Factsheet for Bra006883.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78047	Canola	plastid	97.64	99.04
CDX73675	Canola	cytosol, mitochondrion, plastid	98.58	98.58
Bra033466.1-P	Field mustard	cytosol, plastid	90.57	90.57
AT3G51930.1	Thale cress	cytosol, plastid	87.5	89.4
VIT_13s0019g01680.t01	Wine grape	plastid	62.03	66.25
PGSC0003DMT400017340	Potato	plastid	64.15	66.18
Solyc01g068250.2.1	Tomato	cytosol	64.62	65.87
KRH39863	Soybean	cytosol, plastid	62.97	64.18
GSMUA_Achr11P...	Banana	cytosol	53.07	60.48
Os01t0946100-02	Rice	cytosol, plastid	52.12	51.28
TraesCS3A01G485100.1	Wheat	plastid	50.24	51.2
KXG34097	Sorghum	plastid	51.89	50.23
HORVU3Hr1G106030.1	Barley	plastid	50.94	49.54
TraesCS3B01G532800.1	Wheat	cytosol, plastid	50.24	49.31
TraesCS3D01G480400.1	Wheat	plastid	49.76	49.3
Zm00001d042132_P001	Maize	plastid	44.58	47.01
Bra015611.1-P	Field mustard	cytosol	34.2	39.94
Bra032795.1-P	Field mustard	cytosol	29.01	39.81
Bra037545.1-P	Field mustard	cytosol	34.43	39.25
Bra024637.1-P	Field mustard	plastid	34.67	36.03
Bra007751.1-P	Field mustard	nucleus	37.74	35.56
Bra034310.1-P	Field mustard	nucleus	37.5	35.41
Bra000611.1-P	Field mustard	nucleus	32.08	34.96
Bra022372.1-P	Field mustard	cytosol	35.85	33.19
Bra014189.1-P	Field mustard	nucleus	36.08	32.76
Bra012504.1-P	Field mustard	cytosol, mitochondrion	32.08	32.54
Bra001728.1-P	Field mustard	nucleus	34.91	32.24
Bra010967.1-P	Field mustard	cytosol, plastid	31.84	31.99
Bra036080.1-P	Field mustard	cytosol	34.67	31.89
Bra012903.1-P	Field mustard	cytosol	33.49	30.6
Bra011525.1-P	Field mustard	cytosol	32.31	28.6
Bra034622.1-P	Field mustard	cytosol	32.31	28.02
Bra017646.1-P	Field mustard	cytosol	32.08	27.81

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EnsemblPlantsGene:Bra006883	EnsemblPlants:Bra006883.1	EnsemblPlants:Bra006883.1-P	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M4CRP2	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF223	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002542DA8	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT3G51930 (E=4e-183) | transducin family protein / WD-40 repeat family protein

Coordinates

chrA09:+:25995444..25996718

Molecular Weight (calculated)

46171.0 Da

IEP (calculated)

9.351

GRAVY (calculated)

-0.261

Length

424 amino acids

Sequence
(BLAST)

001: MVRSIQEGGV LMMSSSSSST TTSNNGTDSD DSLSPSSASS KSFVLTTLPP PITGAYKPLA VLSAHVGSVS SLALCGEFLL SASQGKDIIV WQQPDLKIFT
101: KFGQGDGSVK ALVSVGSKVF TAHQDSRIRV WKVSRRSSEN AFRLVDSLPT TKDYLGKFMK QSNYVQTRRN HKRLWIEHAD SISCLAVHAG IIYSGSWDKT
201: LKVWRLSDLK CLESIKAHDD AINGLVAGEG RVYSASADGK IKIWGKEKRK KADSSLSSSS SSWSHVLKAT LEGHAEVSVN SVVVSGEGKW VYGGGSDGFV
301: MGWERSEKGG DFEEWRLGFE MRGHKMAVLC MCVVGEMVCS GSADKSIGLW KREESGRLCK FGVIHGHEGP VKCLQASPNN VGAGFMLYSG SLDKSIRVWW
401: VSKQDCVEEE KKKTSFRTLL MQQG

Best Arabidopsis Sequence Match ( AT3G51930.1 )
(BLAST)

001: MVRSIQEGVL MSSSSSSTTS NSNDSDGSLS PSASTKSFVL NTLRPPITGA YKPLAVLSAH VGSVSSLALC GEFLLSASQG KDIIVWQQPD LKIFAKFGQG
101: DGSVKALVSV GSKVFTAHQD SRIRVWKVSR RNSENAFRLV DTLPTTKDYL GKFMKQSNYV QTRRNHKRLW IEHADSISCL AVHAGIIYSG SWDKTLKVWR
201: LSDLKCLESI KAHDDAINGL VAGDGRVYSA SADGKVKIWG KEKRKQIEST SSSSSSLHVL KATLEGRAEV SVNSVVVSGD GNWVYGGGSD GFVIGWEKKE
301: KEGDFEEWRL GFETRGHNMA VLCMCVVGEM VCSGSADKSI GLWRREVTGM LCKFGVIHGH EGPVKCLQAS PNNVGAGFML YSGGLDKSLR VWWVPKQDNL
401: EEKKSSFKTL LTQKE

Arabidopsis Description

At3g51930 [Source:UniProtKB/TrEMBL;Acc:Q9SV11]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.