CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 6
cytosol 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g01680.t01	Wine grape	plastid	68.75	72.04
PGSC0003DMT400017340	Potato	plastid	69.95	70.8
Solyc01g068250.2.1	Tomato	cytosol	69.71	69.71
AT3G51930.1	Thale cress	cytosol, plastid	64.66	64.82
CDY23176	Canola	cytosol, plastid	65.62	64.39
Bra033466.1-P	Field mustard	cytosol, plastid	65.14	63.92
CDX78047	Canola	plastid	63.94	63.64
Bra006883.1-P	Field mustard	plastid	64.18	62.97
CDX73675	Canola	cytosol, mitochondrion, plastid	63.94	62.74
GSMUA_Achr11P...	Banana	cytosol	56.01	62.63
TraesCS3A01G485100.1	Wheat	plastid	52.4	52.4
Os01t0946100-02	Rice	cytosol, plastid	53.61	51.74
TraesCS3B01G532800.1	Wheat	cytosol, plastid	53.12	51.16
TraesCS3D01G480400.1	Wheat	plastid	52.16	50.7
HORVU3Hr1G106030.1	Barley	plastid	52.88	50.46
KXG34097	Sorghum	plastid	52.4	49.77
Zm00001d042132_P001	Maize	plastid	45.67	47.26
KRH57169	Soybean	cytosol, plasma membrane	30.05	36.66
KRH57017	Soybean	plastid	32.21	34.01
KRH15278	Soybean	cytosol	29.09	33.24
KRH05757	Soybean	nucleus	36.78	32.83
KRH03884	Soybean	cytosol	29.57	32.71
KRH74694	Soybean	nucleus	33.65	32.33
KRH03365	Soybean	nucleus, plastid	31.25	32.02
KRH63468	Soybean	plastid	31.97	31.82
KRH54449	Soybean	plastid	31.97	31.59
KRH76925	Soybean	nucleus	34.62	31.3
KRH28540	Soybean	nucleus	34.38	31.22
KRH69465	Soybean	nucleus	32.93	31.21
KRH43090	Soybean	plastid	31.01	29.93
KRH52729	Soybean	cytosol	27.4	24.95
KRH62060	Soybean	cytosol	24.04	24.1
KRH23424	Soybean	plastid	22.84	21.54
KRH09907	Soybean	cytosol, plastid	12.98	20.69
KRH24543	Soybean	cytosol, nucleus	32.45	17.88

Protein Annotations

EntrezGene:100803028	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02006008	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_09G225100
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:K7LFF8	EnsemblPlants:KRH39863	ProteinID:KRH39863	ProteinID:KRH39863.1	PFAM:PF00400	PRINTS:PR00320
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF223	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI00029693C3	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:44972747..44974528

Molecular Weight (calculated)

45620.3 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.232

Length

416 amino acids

Sequence
(BLAST)

001: MNSLVAQTEF SAPMDLKPKL WNTPPSTSSS CSSSSCSSRS ISSESDESPF CSQRIPIPIV SGGFFHSHRS LSVLSGHVGS VSCLALCGEF ILSASQGKDI
101: IVWQQPDLRV FAKFGQGDGS VKALATVGNK VFTAHQDSRI RVWKVSRSSE NVFKLVDTLP TTKDYLGKFM KQSNYVQTRR HHKRLWIEHA DSISCLTVYN
201: GFIYSGSWDK TLKVWRLSDL KCLESIKAHD DAINGLVACK GVMYSASADG KIKAWGRKKD GKGEEHGLKG VLEGHKDVSF NAVVVSEDGK WVYGGGSDGF
301: VMGWEGLESC CWKLVSETKA HEMAVLCMCL MGEILCSGSA DKTIGIWRRE TFGKLCKVGV ISGHEGPVKC LQASPNRIGG GFLLYSGSLD RSVRVWWVPR
401: YNNDAEEQVE DNNSTC

Best Arabidopsis Sequence Match ( AT3G51930.1 )
(BLAST)

001: MVRSIQEGVL MSSSSSSTTS NSNDSDGSLS PSASTKSFVL NTLRPPITGA YKPLAVLSAH VGSVSSLALC GEFLLSASQG KDIIVWQQPD LKIFAKFGQG
101: DGSVKALVSV GSKVFTAHQD SRIRVWKVSR RNSENAFRLV DTLPTTKDYL GKFMKQSNYV QTRRNHKRLW IEHADSISCL AVHAGIIYSG SWDKTLKVWR
201: LSDLKCLESI KAHDDAINGL VAGDGRVYSA SADGKVKIWG KEKRKQIEST SSSSSSLHVL KATLEGRAEV SVNSVVVSGD GNWVYGGGSD GFVIGWEKKE
301: KEGDFEEWRL GFETRGHNMA VLCMCVVGEM VCSGSADKSI GLWRREVTGM LCKFGVIHGH EGPVKCLQAS PNNVGAGFML YSGGLDKSLR VWWVPKQDNL
401: EEKKSSFKTL LTQKE

Arabidopsis Description

At3g51930 [Source:UniProtKB/TrEMBL;Acc:Q9SV11]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.