CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05757	Soybean	nucleus	84.62	66.09
VIT_18s0001g11600.t01	Wine grape	nucleus	65.93	52.63
Bra034310.1-P	Field mustard	nucleus	62.09	50.33
CDY48182	Canola	nucleus	62.09	50.33
PGSC0003DMT400039941	Potato	cytosol	56.04	50.12
Solyc12g088980.1.1	Tomato	cytosol	55.77	50.0
PGSC0003DMT400016680	Potato	cytosol	60.99	49.78
Solyc07g025140.2.1	Tomato	cytosol	60.44	49.77
CDX77053	Canola	cytosol	61.26	49.67
PGSC0003DMT400008621	Potato	mitochondrion	58.24	49.3
AT2G26490.1	Thale cress	cytosol	62.64	49.03
Bra007751.1-P	Field mustard	nucleus	60.44	48.89
CDX76704	Canola	cytosol	62.36	48.82
CDY11480	Canola	cytosol	62.09	48.6
Solyc04g079700.2.1	Tomato	cytosol	59.07	48.42
GSMUA_Achr3P30740_001	Banana	cytosol	42.58	44.29
KRH76925	Soybean	nucleus	54.12	42.83
TraesCS5D01G389000.1	Wheat	cytosol	54.95	42.11
TraesCS5B01G382700.1	Wheat	cytosol	54.95	42.11
EER93490	Sorghum	cytosol, endoplasmic reticulum, nucleus	56.04	41.98
TraesCS5A01G379200.1	Wheat	cytosol	54.95	41.93
KRH28540	Soybean	nucleus	52.75	41.92
HORVU5Hr1G093830.1	Barley	cytosol	54.95	41.75
Os03t0738700-01	Rice	plasma membrane	56.04	41.72
GSMUA_Achr4P10690_001	Banana	cytosol, endoplasmic reticulum, plastid	39.29	38.34
GSMUA_Achr6P20880_001	Banana	cytosol	38.19	35.46
GSMUA_AchrUn_...	Banana	nucleus	37.09	33.92
GSMUA_Achr4P07470_001	Banana	endoplasmic reticulum, plasma membrane	42.58	31.12
KRH57169	Soybean	cytosol, plasma membrane	28.02	29.91
KRH57017	Soybean	plastid	31.87	29.44
KRH39863	Soybean	cytosol, plastid	33.24	29.09
KRH74694	Soybean	nucleus	33.79	28.41
KRH63468	Soybean	plastid	31.87	27.75
KRH62060	Soybean	cytosol	31.59	27.71
KRH52729	Soybean	cytosol	34.62	27.57
KRH03884	Soybean	cytosol	28.3	27.39
KRH03365	Soybean	nucleus, plastid	30.49	27.34
KRH54449	Soybean	plastid	30.77	26.6
KRH69465	Soybean	nucleus	31.87	26.42
KRH43090	Soybean	plastid	31.04	26.22
GSMUA_Achr4P03080_001	Banana	mitochondrion, nucleus, peroxisome, plasma membrane	43.68	24.84
KRH24543	Soybean	cytosol, nucleus	48.9	23.58
KRH23424	Soybean	plastid	28.3	23.36
KRH09907	Soybean	cytosol, plastid	12.64	17.62

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A0R0GAG1	EMBL:ACUP02008572	EMBL:ACUP02008573	InterPro:G-protein_beta_WD-40_rep
EnsemblPlantsGene:GLYMA_14G078900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	EnsemblPlants:KRH15278	ProteinID:KRH15278	ProteinID:KRH15278.1	PFAM:PF00400	PRINTS:PR00320
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF128	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0006EDF069	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

hypothetical protein

Coordinates

chr14:-:6708124..6714523

Molecular Weight (calculated)

39812.1 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.335

Length

364 amino acids

Sequence
(BLAST)

001: MFGETAPRPK FVQSEPRMSA TEVLTDDEFA MRRSSTVSPM SSYCSEPGRL SGEGSPMMMS PWNQTTNSSF SKPHWSQEHN STLHEALVGS LIRQEGHIYS
101: LAASGDLLFT GSDSKNIRVW KNLKEHSGFK SNSGLVRRHK TALWIRHSDA VSCLSLSEDK TYLYSASWDR TIKVWRISDS RCLESIHAHD DAVNSVVCGD
201: GDVMFSGSAD GTVKVWRREM RGKGLKHAAV KTLLKQEYAV TALAVGEAGS MVYCGASDGL VNCWGSGKNY AHGGVLKGHK LAVLCLAAAG TLVFSGSADK
301: TLCVWKREGV IHTCVSVLTG HNGPLKCLAV EENRESGEKG EQDRRWVLYS GSLDKSVKIW SVSE

Best Arabidopsis Sequence Match ( AT2G26490.1 )
(BLAST)

001: MFTEADSIPR AKYANMMHSD PNLSSTMTQQ TEEEYGIRNS SASAVGTGMY DRMSCEGSPM MMSPWNQATP FTQTQWSTVE ENLPQNGLIG SLVREEGHIY
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH

Arabidopsis Description

JGBProtein JINGUBANG [Source:UniProtKB/Swiss-Prot;Acc:O48716]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.