CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63468	Soybean	plastid	89.31	89.95
KRH57017	Soybean	plastid	64.13	68.53
KRH03365	Soybean	nucleus, plastid	63.42	65.76
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	60.33	62.56
PGSC0003DMT400062862	Potato	cytosol	53.92	57.61
CDY21432	Canola	cytosol, nucleus, plastid	52.02	56.44
Bra000611.1-P	Field mustard	nucleus	51.78	56.04
KRH74694	Soybean	nucleus	57.01	55.43
AT5G50120.1	Thale cress	nucleus	51.07	55.41
CDY70872	Canola	nucleus	49.64	54.29
KRH69465	Soybean	nucleus	56.53	54.21
Solyc03g113850.1.1	Tomato	cytosol, plastid	54.63	48.52
GSMUA_Achr6P36100_001	Banana	cytosol	44.66	47.84
Os02t0740900-01	Rice	plastid	44.18	45.7
TraesCS7B01G100800.1	Wheat	cytosol	40.62	44.3
HORVU7Hr1G039810.1	Barley	plastid	40.14	44.01
GSMUA_Achr7P19910_001	Banana	cytosol	45.61	43.64
Zm00001d017994_P001	Maize	cytosol	36.1	42.7
KRH43090	Soybean	plastid	43.47	42.46
EES07284	Sorghum	cytosol	43.23	41.74
KRH57169	Soybean	cytosol, plasma membrane	33.02	40.76
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	37.05	39.1
KRH03884	Soybean	cytosol	32.78	36.7
TraesCS7A01G195200.1	Wheat	cytosol	40.38	34.14
TraesCS7D01G196700.1	Wheat	cytosol	40.14	34.0
KRH39863	Soybean	cytosol, plastid	31.59	31.97
KRH15278	Soybean	cytosol	26.6	30.77
KRH05757	Soybean	nucleus	33.97	30.69
KRH28540	Soybean	nucleus	32.07	29.48
KRH76925	Soybean	nucleus	31.83	29.13
KRH62060	Soybean	cytosol	28.27	28.67
KRH52729	Soybean	cytosol	30.88	28.45
KRH23424	Soybean	plastid	26.6	25.4
KRH09907	Soybean	cytosol, plastid	13.54	21.84
KRH24543	Soybean	cytosol, nucleus	31.59	17.62

Protein Annotations

EntrezGene:100815608	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02003524	EnsemblPlantsGene:GLYMA_06G185900	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1KCK1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
EnsemblPlants:KRH54449	ProteinID:KRH54449	ProteinID:KRH54449.1	PFAM:PF00400	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22844	PANTHER:PTHR22844:SF278	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00023392E9	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:16147124..16149227

Molecular Weight (calculated)

46472.5 Da

IEP (calculated)

8.715

GRAVY (calculated)

-0.422

Length

421 amino acids

Sequence
(BLAST)

001: MEYQYHPSSY GVSSSSHSNH HQQGSTTPKS LSSQRSLVSV PSLNHHHHLH TPNSTVYHHC LTTLKGHTSS YISSLTLSGK FLYTGSSDRE IRSWNRIPEN
101: SSNNNNNSNT VLTGNGAVKS LVIQSNKLFS AHQDHKIRVW KISTNNNNDN DHDQKYTHVA TLPTLGDRAS KILIPKNQVQ IRRHKKCTWV HHVDTVSALA
201: LSRDGTLLYS VSWDRTLKIW KTKDFTCLES LANAHDDAIN AVAVSYDGRV YTGSADKKIK VWKKFAGEKK HTLIETLEKH NSGVNALALS SDENVVYSGA
301: CDRAILVWEK KEGDDGKMGV VGALRGHTKS ILCLSVVADL VCSGSADTTI RIWRGCVDSH EYSCLAVLEG HRASIKCISA VVDCNNNNNN TSQSEALLSF
401: LVYSGGLDCD IKVWQILLPA S

Best Arabidopsis Sequence Match ( AT5G50120.1 )
(BLAST)

001: MIQFQESEEE PDFSQEDHLT SSSQPLHQCI ATLVCHTASY ISSLTLAGKR LYTGSNDGVV RLWNANTLET LAEASSNGDV ITGERGGGGA VKSLVILADK
101: LFTAHQDHKI RVWKINDVVE EDVGGKKYMH LATMPTISDR FAKCLMPKNQ VEIRRHKKAS WVHHVDAVSG LALSRDGTLL YSVSWDRTLK IWRTTDFKCL
201: ESFTNAHDDA INAVALSENG DIYTGSSDQR IKVWRKNINE ENVKKKRKHS LVAILSEHNS GINALALSGT NGSLLHSGGS DGSILVWERD DGGDIVVVGM
301: LRGHTESVLC LAVVSDILCS GSADKTVRLW KCSAKDYSCL AMLEGHLGPV KCLTGAFRDS RKADEASYHI YSGGLDSQVK VWQVLVPA

Arabidopsis Description

Similarity to GTP-binding regulatory protein and WD-repeat protein [Source:UniProtKB/TrEMBL;Acc:Q9FG99]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.