CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017994_P001	Maize	cytosol	71.33	87.36
Os02t0740900-01	Rice	plastid	69.04	73.96
GSMUA_Achr6P36100_001	Banana	cytosol	49.77	55.22
GSMUA_Achr7P19910_001	Banana	cytosol	51.38	50.91
Bra024637.1-P	Field mustard	plastid	45.87	49.02
CDY14665	Canola	plastid	45.64	48.89
CDY16242	Canola	plastid	45.64	48.66
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	44.72	48.03
AT1G24130.1	Thale cress	cytosol, plastid	45.64	47.95
KRH57017	Soybean	plastid	42.43	46.95
PGSC0003DMT400062862	Potato	cytosol	41.51	45.94
VIT_01s0026g00880.t01	Wine grape	cytosol	44.95	45.9
KRH63468	Soybean	plastid	42.43	44.26
KRH74694	Soybean	nucleus	43.58	43.88
KRH03365	Soybean	nucleus, plastid	40.83	43.84
CDY21432	Canola	cytosol, nucleus, plastid	38.76	43.56
KRH54449	Soybean	plastid	41.74	43.23
Bra000611.1-P	Field mustard	nucleus	38.53	43.19
Solyc04g005020.2.1	Tomato	plastid	42.2	42.89
Solyc05g006340.2.1	Tomato	cytosol	40.37	42.41
PGSC0003DMT400004842	Potato	plastid	41.74	42.23
KRH69465	Soybean	nucleus	42.43	42.14
CDY70872	Canola	nucleus	36.93	41.82
PGSC0003DMT400040333	Potato	cytosol	40.6	41.07
AT5G50120.1	Thale cress	nucleus	36.24	40.72
Solyc03g113850.1.1	Tomato	cytosol, plastid	41.74	38.4
KXG26570	Sorghum	cytosol, plastid	39.22	36.31
EER93490	Sorghum	cytosol, endoplasmic reticulum, nucleus	33.03	29.63
KXG34097	Sorghum	plastid	29.59	29.45
OQU91330	Sorghum	mitochondrion	30.05	26.41
OQU79483	Sorghum	cytosol, mitochondrion, nucleus	29.59	25.44
EES02188	Sorghum	cytosol	29.59	23.98

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:8068600	UniProt:C5XZ64	EnsemblPlants:EES07284	ProteinID:EES07284
ProteinID:EES07284.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22844	PANTHER:PTHR22844:SF278	SMART:SM00320	EnsemblPlantsGene:SORBI_3004G242900	SUPFAM:SSF50978	UniParc:UPI0001A85A22
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_002454308.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:59091869..59093179

Molecular Weight (calculated)

46661.3 Da

IEP (calculated)

8.385

GRAVY (calculated)

-0.178

Length

436 amino acids

Sequence
(BLAST)

001: MNSASEQELS QIRQHEPAEA MLSQAVSLSS QPSLPSLPSL GPRDLNVSPC HHRCVATLRD HASYVSALAF DGHSLYSASS DGRIRVCPLG DASGRQEQQR
101: DDDDGCRATV VVAACDSSVK CLLATGSNGL LLSSHQDGKI MAWRTGSRKD GTPRLVLRAV LPTCVDRLLT FLLPWSYVQV RRHRWRTWVH HVDAVTALAV
201: SPDGALLYSA SWDRSVKVWR LPGFRCVESI AAAHDDAINA LEVSPDGHVY TGSADKKIKA WRRHPERRNK HVLVQTMERH RSAVNALALG ADGKVLYSGA
301: CDRSVVVWER ADGGAGRMEA TGTLRGHAKA ILCLAAAGDV VCSGSADRTV RVWRRGAENN TGYTRLAVLE GHGAPVKSLA LVYGRDRGLF SGWGDPEEGS
401: SGGGGGAGAG GHCAIVCSGA LDGEVKIWSV LFPVLL

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.