Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017994_P001 | Maize | cytosol | 61.18 | 69.94 |
| EES07284 | Sorghum | cytosol | 73.96 | 69.04 |
| Os06t0238700-00 | Rice | cytosol, nucleus, peroxisome, plastid | 58.48 | 59.65 |
| GSMUA_Achr6P36100_001 | Banana | cytosol | 53.32 | 55.22 |
| GSMUA_Achr7P19910_001 | Banana | cytosol | 53.32 | 49.32 |
| KRH57017 | Soybean | plastid | 45.7 | 47.21 |
| AT1G24130.1 | Thale cress | cytosol, plastid | 46.19 | 45.3 |
| CDY16242 | Canola | plastid | 45.45 | 45.23 |
| CDY14665 | Canola | plastid | 45.21 | 45.21 |
| Bra024637.1-P | Field mustard | plastid | 45.21 | 45.1 |
| VIT_17s0000g07690.t01 | Wine grape | nucleus, plastid | 44.96 | 45.07 |
| VIT_01s0026g00880.t01 | Wine grape | cytosol | 47.17 | 44.96 |
| KRH63468 | Soybean | plastid | 45.7 | 44.5 |
| KRH54449 | Soybean | plastid | 45.7 | 44.18 |
| PGSC0003DMT400062862 | Potato | cytosol | 42.75 | 44.16 |
| KRH03365 | Soybean | nucleus, plastid | 43.0 | 43.1 |
| CDY21432 | Canola | cytosol, nucleus, plastid | 40.54 | 42.53 |
| KRH74694 | Soybean | nucleus | 45.21 | 42.49 |
| Solyc05g006340.2.1 | Tomato | cytosol | 43.0 | 42.17 |
| Bra000611.1-P | Field mustard | nucleus | 40.29 | 42.16 |
| PGSC0003DMT400004842 | Potato | plastid | 44.23 | 41.76 |
| Solyc04g005020.2.1 | Tomato | plastid | 43.98 | 41.72 |
| KRH69465 | Soybean | nucleus | 44.72 | 41.46 |
| CDY70872 | Canola | nucleus | 38.82 | 41.04 |
| AT5G50120.1 | Thale cress | nucleus | 38.82 | 40.72 |
| PGSC0003DMT400040333 | Potato | cytosol | 42.75 | 40.37 |
| Solyc03g113850.1.1 | Tomato | cytosol, plastid | 43.24 | 37.13 |
| Os04t0481600-00 | Rice | cytosol | 40.05 | 31.53 |
| Os01t0946100-02 | Rice | cytosol, plastid | 30.22 | 28.54 |
| Os03t0738700-01 | Rice | plasma membrane | 34.15 | 28.43 |
| Os03t0625300-00 | Rice | mitochondrion | 31.45 | 24.38 |
| Os01t0232200-00 | Rice | cytosol | 28.5 | 22.1 |
| Os12t0594000-00 | Rice | cytosol, peroxisome, plastid | 32.19 | 21.87 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | ProteinID:BAD15763.1 | ProteinID:BAF09991.1 | ProteinID:BAS80847.1 | InterPro:G-protein_beta_WD-40_rep |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| EnsemblPlantsGene:Os02g0740900 | EnsemblPlants:Os02t0740900-01 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR22844 | PANTHER:PTHR22844:SF278 | UniProt:Q6Z7S5 | SMART:SM00320 | SUPFAM:SSF50978 |
| UniParc:UPI0000358B73 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
OsWD40-54WD-40 repeat containing protein. (Os02t0740900-01)
Coordinates
chr2:+:30987024..30988403
Molecular Weight (calculated)
42869.5 Da
IEP (calculated)
8.224
GRAVY (calculated)
-0.120
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSGAMSLAS QPSLRSLPSL DVHDLNTSPS LHQFIATIKG HSSASAYVSA LAVDGDSLYI ASSDGSIRLW ALDGARRSQE EQQQDDGCSS SSSSTTVADT
101: DSSVKSLLAT GNGGLLLSSH QDGKIRAWRA GSRRRDGETR PQLVLRAVLP TAVDRLRTCL LPWSYVEIRR HRRCTWVHHV DAVTALAVSP DGALLYSASW
201: DRSIKVWSLP GFRCVESIAA AHDDAINALA VSPDGRVYTG SADKKIKAWT RGPGQRKHAL VGTMERHRSA VNALALGANG KVLYSGACDR SVVVWESAGG
301: GDGGMEATGT LRGHARAILC LAAAGELVCS GSADRTVRVW RRGGAENNGY TCLAVMESHG AAVKSLALVR GGRDDDGSCS SEGSSALVCS GALDGDVKIW
401: SVFIPCL
101: DSSVKSLLAT GNGGLLLSSH QDGKIRAWRA GSRRRDGETR PQLVLRAVLP TAVDRLRTCL LPWSYVEIRR HRRCTWVHHV DAVTALAVSP DGALLYSASW
201: DRSIKVWSLP GFRCVESIAA AHDDAINALA VSPDGRVYTG SADKKIKAWT RGPGQRKHAL VGTMERHRSA VNALALGANG KVLYSGACDR SVVVWESAGG
301: GDGGMEATGT LRGHARAILC LAAAGELVCS GSADRTVRVW RRGGAENNGY TCLAVMESHG AAVKSLALVR GGRDDDGSCS SEGSSALVCS GALDGDVKIW
401: SVFIPCL
001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI
Arabidopsis Description
F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.