Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G031720.2 | Barley | cytosol | 81.9 | 84.81 |
| TraesCS3A01G156000.1 | Wheat | cytosol | 81.52 | 84.58 |
| TraesCS3D01G163800.1 | Wheat | cytosol | 81.14 | 84.36 |
| TraesCS3B01G182500.1 | Wheat | cytosol | 81.14 | 84.36 |
| Zm00001d009003_P001 | Maize | cytosol | 76.0 | 76.73 |
| Zm00001d039292_P001 | Maize | cytosol | 76.76 | 75.47 |
| EES02188 | Sorghum | cytosol | 76.57 | 74.72 |
| GSMUA_Achr10P... | Banana | nucleus | 41.14 | 45.96 |
| VIT_04s0008g03540.t01 | Wine grape | cytosol | 39.05 | 45.76 |
| KRH52729 | Soybean | cytosol | 39.24 | 45.08 |
| KRH62060 | Soybean | cytosol | 35.43 | 44.82 |
| VIT_09s0002g04040.t01 | Wine grape | nucleus | 36.0 | 42.19 |
| PGSC0003DMT400024834 | Potato | cytosol | 38.1 | 42.11 |
| VIT_09s0002g04050.t01 | Wine grape | cytosol | 34.1 | 39.96 |
| Os06t0238700-00 | Rice | cytosol, nucleus, peroxisome, plastid | 24.0 | 31.58 |
| Os03t0738700-01 | Rice | plasma membrane | 27.81 | 29.86 |
| Os02t0740900-01 | Rice | plastid | 22.1 | 28.5 |
| Os01t0946100-02 | Rice | cytosol, plastid | 22.67 | 27.61 |
| Os03t0625300-00 | Rice | mitochondrion | 26.29 | 26.29 |
| Os12t0594000-00 | Rice | cytosol, peroxisome, plastid | 28.76 | 25.21 |
| Os04t0481600-00 | Rice | cytosol | 20.0 | 20.31 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A0P0V0J2 | ProteinID:BAS71183.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | EnsemblPlantsGene:Os01g0232200 |
| EnsemblPlants:Os01t0232200-00 | PFAM:PF00400 | PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22844 |
| PANTHER:PTHR22844:SF213 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000009C5D5 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
OsWD40-10WD40 repeat domain containing protein. (Os01t0232200-00)
Coordinates
chr1:-:7307881..7309458
Molecular Weight (calculated)
55190.3 Da
IEP (calculated)
7.357
GRAVY (calculated)
-0.102
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFGRRKSFS FFEEDWKARP TAAARTPVHH HYARSPAREA APHTPPRLSL SSVHGVELPG LVGVGGGGGG GGGVGGMCSP WVQSPLHGRV RFPPSPAAIY
101: HCLSALHRLD GDVHALAVAR GVLFTASDSG RVRAWAAPGC FNRGYLDVGR GRVPAIAACG GTLVTSHSRD HHVRVWTVCA SAVCDHIRAK KAATLPAKGG
201: ILSFTKRRPP HHRDTVSCLV LHAVAGLLYT ASHDHTVKAW KLSDGSCADS FVAHDGAINA MLINEADGCI FTGSADGTVK MWRRVYGGTT HALIIALRSE
301: LSPVNALTLC HAAAATGATR RCFLYAGSSD GYVNVWEKEA SAGRPAHAGF LKGHRLAVFC LASGCGGRVV VSGSEDATMR VWRRDGKGGS TSHTCLAVIE
401: GHRGPVRCLA VGGGEAGDVE GSMVVYSAGL DKSVKVWRIR VVGKEEEEDD DEDDLDDDDV DVVVGEEDAA ETMSTAAGKV DTEARDEAAA AAAVVAEEEA
501: EVVVGLGATP VLSPVWVEKR RTSRG
101: HCLSALHRLD GDVHALAVAR GVLFTASDSG RVRAWAAPGC FNRGYLDVGR GRVPAIAACG GTLVTSHSRD HHVRVWTVCA SAVCDHIRAK KAATLPAKGG
201: ILSFTKRRPP HHRDTVSCLV LHAVAGLLYT ASHDHTVKAW KLSDGSCADS FVAHDGAINA MLINEADGCI FTGSADGTVK MWRRVYGGTT HALIIALRSE
301: LSPVNALTLC HAAAATGATR RCFLYAGSSD GYVNVWEKEA SAGRPAHAGF LKGHRLAVFC LASGCGGRVV VSGSEDATMR VWRRDGKGGS TSHTCLAVIE
401: GHRGPVRCLA VGGGEAGDVE GSMVVYSAGL DKSVKVWRIR VVGKEEEEDD DEDDLDDDDV DVVVGEEDAA ETMSTAAGKV DTEARDEAAA AAAVVAEEEA
501: EVVVGLGATP VLSPVWVEKR RTSRG
001: MRNETGGTMV VDLQTDPYNN IHSRHNLSYD LSEGPKPRPK FGNISKTDHD EIFPPDDPII INSNVTHQRF SSVSASTMSS GPASGEGSPC VMSPWARVSP
101: PWGADFNEDN VLETNGLIGS IVRKEGHIYS LAASGDLLYT GSDSKNIRVW KNLKEHAGFK SSSGLIKAIV IFGDRIFTGH QDGKIRIWKV SKRKPGKHKR
201: VGTLPTFKSM VKSSVNPKHF MEVRRNRNSV KTKHNDAVSS LSLDVELGLL YSSSWDTTIK VWRIADSKCL ESIHAHDDAI NSVMSGFDDL VFTGSADGTV
301: KVWKRELQGK GTKHTLAQVL LKQENAVTAL AVKSQSSIVY CGSSDGLVNY WERSKRSFTG GILKGHKSAV LCLGIAGNLL LSGSADKNIC VWRRDPSDKS
401: HQCLSVLTGH MGPVKCLAVE EERACHQGAK ASVAEGDRKW IIYSGSLDKS VKVWRVSERM ATWKEMDEPA ASSERKSSSS PHEGSGAWSS RNVEK
101: PWGADFNEDN VLETNGLIGS IVRKEGHIYS LAASGDLLYT GSDSKNIRVW KNLKEHAGFK SSSGLIKAIV IFGDRIFTGH QDGKIRIWKV SKRKPGKHKR
201: VGTLPTFKSM VKSSVNPKHF MEVRRNRNSV KTKHNDAVSS LSLDVELGLL YSSSWDTTIK VWRIADSKCL ESIHAHDDAI NSVMSGFDDL VFTGSADGTV
301: KVWKRELQGK GTKHTLAQVL LKQENAVTAL AVKSQSSIVY CGSSDGLVNY WERSKRSFTG GILKGHKSAV LCLGIAGNLL LSGSADKNIC VWRRDPSDKS
401: HQCLSVLTGH MGPVKCLAVE EERACHQGAK ASVAEGDRKW IIYSGSLDKS VKVWRVSERM ATWKEMDEPA ASSERKSSSS PHEGSGAWSS RNVEK
Arabidopsis Description
At4g34380 [Source:UniProtKB/TrEMBL;Acc:Q9SZ03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.