CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62060	Soybean	cytosol	89.06	98.07
VIT_04s0008g03540.t01	Wine grape	cytosol	73.74	75.22
PGSC0003DMT400024834	Potato	cytosol	66.96	64.42
GSMUA_Achr10P...	Banana	nucleus	55.14	53.62
TraesCS3B01G182500.1	Wheat	cytosol	45.3	40.99
TraesCS3A01G156000.1	Wheat	cytosol	45.3	40.91
HORVU3Hr1G031720.2	Barley	cytosol	45.3	40.83
TraesCS3D01G163800.1	Wheat	cytosol	45.08	40.79
Zm00001d009003_P001	Maize	cytosol	45.3	39.81
Os01t0232200-00	Rice	cytosol	45.08	39.24
EES02188	Sorghum	cytosol	45.51	38.66
Zm00001d039292_P001	Maize	cytosol	44.86	38.39
KRH15278	Soybean	cytosol	27.57	34.62
KRH23424	Soybean	plastid	32.6	33.79
KRH57017	Soybean	plastid	27.79	32.23
KRH05757	Soybean	nucleus	32.82	32.19
KRH63468	Soybean	plastid	29.1	31.82
KRH57169	Soybean	cytosol, plasma membrane	23.63	31.67
KRH28540	Soybean	nucleus	31.51	31.44
KRH09907	Soybean	cytosol, plastid	17.72	31.03
KRH54449	Soybean	plastid	28.45	30.88
KRH76925	Soybean	nucleus	30.85	30.65
KRH03365	Soybean	nucleus, plastid	26.26	29.56
KRH43090	Soybean	plastid	27.57	29.23
KRH74694	Soybean	nucleus	27.57	29.1
KRH03884	Soybean	cytosol	23.41	28.46
KRH39863	Soybean	cytosol, plastid	24.95	27.4
KRH69465	Soybean	nucleus	26.26	27.33
KRH24543	Soybean	cytosol, nucleus	30.85	18.68

Protein Annotations

EntrezGene:100816148	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02003429	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_06G084700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:K7KTX1	EnsemblPlants:KRH52729	ProteinID:KRH52729	ProteinID:KRH52729.1	PFAM:PF00400	PRINTS:PR00320
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF213	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000233A315	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:6510507..6512394

Molecular Weight (calculated)

51974.2 Da

IEP (calculated)

8.377

GRAVY (calculated)

-0.373

Length

457 amino acids

Sequence
(BLAST)

001: MDHFYGKRTL LSLMDTEKPE PPQSPVHLRV QTHREINEQD VQFSPPRPST TSDGMFPMMM PDSPWTLSPL PTPSPSLLYH CIASLHRHEG NIYAIAASTK
101: GLVFTGSNSS RIRVWKQPDC MDRGYLKASS GEVRAILAYS NMLFSTHKDH KIRIWTFTVS DSFKSKKVGT LPRKTSILMF PSRGKNTPKH KDSVSCMAYY
201: HSEGLLYTGS HDRTVKAWRV SDRKCVDSFV AHEDNVNAIL VNQDDGCLFT GSSDGSVKIW RRVYTEDSHT LTMTLKFQPS PVNALALSCS FNHCFLYSGS
301: SDGMINFWEK ERLCYRFNHG GFLQGHRFAV LCLATVGNML FSGSEDTTIR VWRREEGSCY HECLTVLDGH RGPVRCLAAC LEMEKVVMGF LVYSASLDQT
401: FKVWRIKVLP DEKMCMDYSQ YSDQCEAATR VKIRDYDMSP VLSPSWVEKK LQGSYFQ

Best Arabidopsis Sequence Match ( AT1G49450.1 )
(BLAST)

001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S

Arabidopsis Description

F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.