CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57169	Soybean	cytosol, plasma membrane	80.59	88.86
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	51.06	48.0
Solyc03g111780.1.1	Tomato	cytosol	48.67	45.64
KRH43090	Soybean	plastid	47.87	41.76
GSMUA_Achr9P07610_001	Banana	nucleus	41.22	38.08
KRH57017	Soybean	plastid	39.36	37.56
KRH03365	Soybean	nucleus, plastid	39.1	36.21
GSMUA_Achr3P17140_001	Banana	cytosol	40.16	34.01
KRH63468	Soybean	plastid	37.23	33.49
KRH74694	Soybean	nucleus	37.77	32.79
KRH54449	Soybean	plastid	36.7	32.78
KRH69465	Soybean	nucleus	38.03	32.57
TraesCS2B01G358100.1	Wheat	plastid	35.64	29.98
Zm00001d003272_P001	Maize	cytosol, plastid	35.64	29.71
TraesCS2D01G338900.1	Wheat	plastid	34.84	29.64
GSMUA_Achr8P28630_001	Banana	cytosol	40.43	29.57
KRH39863	Soybean	cytosol, plastid	32.71	29.57
KXG26570	Sorghum	cytosol, plastid	36.97	29.51
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	35.11	29.4
TraesCS2A01G324000.1	Wheat	plastid	34.57	29.35
Zm00001d025699_P001	Maize	plastid	34.84	28.98
KRH05757	Soybean	nucleus	35.9	28.97
KRH15278	Soybean	cytosol	27.39	28.3
KRH28540	Soybean	nucleus	32.98	27.07
KRH76925	Soybean	nucleus	32.98	26.96
Os04t0481600-00	Rice	cytosol	35.37	25.73
KRH23424	Soybean	plastid	27.93	23.81
KRH62060	Soybean	cytosol	26.06	23.61
KRH52729	Soybean	cytosol	28.46	23.41
KRH09907	Soybean	cytosol, plastid	13.56	19.54
KRH24543	Soybean	cytosol, nucleus	32.71	16.29

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02010364	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_17G126000	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1MUK6	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
EnsemblPlants:KRH03884	ProteinID:KRH03884	ProteinID:KRH03884.1	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000294A42D	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:10035434..10037614

Molecular Weight (calculated)

42020.5 Da

IEP (calculated)

9.938

GRAVY (calculated)

-0.267

Length

376 amino acids

Sequence
(BLAST)

001: MSIIREKEKD MKIVNNEKGK VKADHYTPSS PSKMNDSIIL KKRHCITNLK TLTPHITCLA VHRNLLYAAS LNLINVFELT HYSHIDSFNQ SPSSGFVKSI
101: TFTNSKVFTA HQDRKIRVWL ITPSKRHRLL SSLPTVTDRL RRCIVPRNYV TVRRHKTRLW IKHSDTVSGL AVNERFMYSV SWDRSFKVWD LLSYRCLESV
201: KAHEDAINAV AVNGDGTVYT ASADGSIKVW RRDGEAKRHK LVSNIGRQKS TVNALALEGG GAGLFSGGCD GEICRWECGK NGIVEMETLR GHGGAILCLI
301: HVAGLLASAS ADLTVRIWQR ERGSTNGYFC RAVLEGHEKP VKSLVAFSDA EGERDSNAIV TLFSGSLDGE IRVWEL

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.