CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52729	Soybean	cytosol	98.07	89.06
VIT_04s0008g03540.t01	Wine grape	cytosol	72.05	66.74
PGSC0003DMT400024834	Potato	cytosol	65.78	57.47
GSMUA_Achr10P...	Banana	nucleus	53.73	47.45
TraesCS3B01G182500.1	Wheat	cytosol	45.06	37.03
TraesCS3A01G156000.1	Wheat	cytosol	45.06	36.96
HORVU3Hr1G031720.2	Barley	cytosol	45.06	36.88
TraesCS3D01G163800.1	Wheat	cytosol	44.82	36.83
Zm00001d009003_P001	Maize	cytosol	45.78	36.54
Os01t0232200-00	Rice	cytosol	44.82	35.43
EES02188	Sorghum	cytosol	45.78	35.32
Zm00001d039292_P001	Maize	cytosol	45.06	35.02
KRH15278	Soybean	cytosol	27.71	31.59
KRH23424	Soybean	plastid	33.01	31.07
KRH09907	Soybean	cytosol, plastid	19.52	31.03
KRH05757	Soybean	nucleus	33.25	29.61
KRH63468	Soybean	plastid	29.16	28.95
KRH57017	Soybean	plastid	27.23	28.68
KRH57169	Soybean	cytosol, plasma membrane	23.37	28.45
KRH28540	Soybean	nucleus	31.33	28.38
KRH54449	Soybean	plastid	28.67	28.27
KRH76925	Soybean	nucleus	30.6	27.61
KRH03365	Soybean	nucleus, plastid	26.27	26.85
KRH43090	Soybean	plastid	27.23	26.22
KRH03884	Soybean	cytosol	23.61	26.06
KRH74694	Soybean	nucleus	26.75	25.64
KRH39863	Soybean	cytosol, plastid	24.1	24.04
KRH69465	Soybean	nucleus	25.3	23.92
KRH24543	Soybean	cytosol, nucleus	31.33	17.22

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02002216	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_04G083300	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7KIW4
EnsemblPlants:KRH62060	ProteinID:KRH62060	ProteinID:KRH62060.1	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF213	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000296D093
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:7030148..7031520

Molecular Weight (calculated)

47038.9 Da

IEP (calculated)

8.368

GRAVY (calculated)

-0.443

Length

415 amino acids

Sequence
(BLAST)

001: MDFYGKRTLL SLMDTEKPEQ PPQSPVHLRV QTHREISEQD VQFSPPRPSS TTTSDGMFPM MMPDSPWTLS PLPTPSPSLL YHCIASLHRH EGNIYAIAAS
101: KGLVFTGSNS SRIRVWKQPD CMDRGYLKAS SGEVRAILAY SNMLFSTHKD HKIRIWTFTV SDSFKSKKVG TLPRKTSILL FPSRGKNTPK HKDSVSCMAY
201: YHSEGLLYTG SHDRTVKAWR VSDRKCVDSF VAHEDNVNAI LVNQDDGCVF TGSSDGSVKI WRRVYTEDSH TLTMTLKFQP SPVNALALSC SFNHCFHYSG
301: SSDGMINFWE KERLCYRFNH GGFLQGHRFA VLCLATVGNM IFSGSEDTTI RVWRREEGSC YHECLTVLDG HRGPMCMDYS DQCEAATRVK IRDYDMSPVL
401: SPSWVEKKLQ GSYFQ

Best Arabidopsis Sequence Match ( AT1G49450.1 )
(BLAST)

001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S

Arabidopsis Description

F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.