CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09907	Soybean	cytosol, plastid	54.65	92.34
Solyc12g044320.1.1	Tomato	cytosol, plastid	60.77	59.16
PGSC0003DMT400068048	Potato	cytosol, plastid	60.77	59.16
KRH62060	Soybean	cytosol	31.07	33.01
KRH52729	Soybean	cytosol	33.79	32.6
VIT_09s0002g04060.t01	Wine grape	nucleus	64.4	29.93
KRH57017	Soybean	plastid	26.3	29.44
KRH57169	Soybean	cytosol, plasma membrane	22.68	29.33
KRH15278	Soybean	cytosol	23.36	28.3
KRH03365	Soybean	nucleus, plastid	25.85	28.08
KRH03884	Soybean	cytosol	23.81	27.93
KRH63468	Soybean	plastid	25.62	27.03
KRH54449	Soybean	plastid	25.4	26.6
KRH28540	Soybean	nucleus	26.98	25.98
KRH74694	Soybean	nucleus	25.4	25.87
KRH05757	Soybean	nucleus	27.21	25.75
KRH76925	Soybean	nucleus	26.76	25.65
KRH43090	Soybean	plastid	24.94	25.52
KRH69465	Soybean	nucleus	23.81	23.92
KRH39863	Soybean	cytosol, plastid	21.54	22.84
KRH24543	Soybean	cytosol, nucleus	24.94	14.57

Protein Annotations

EntrezGene:100787072	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02008465	EnsemblPlantsGene:GLYMA_13G356400	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7M3S7
EnsemblPlants:KRH23424	ProteinID:KRH23424	ProteinID:KRH23424.1	PFAM:PF00400	PFAM:PF11715	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF188	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000233B20A
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:44458668..44460600

Molecular Weight (calculated)

48519.7 Da

IEP (calculated)

8.852

GRAVY (calculated)

-0.286

Length

441 amino acids

Sequence
(BLAST)

001: MDDSAKSPDP TASFAFRSSS TTPPQSNLLR SHSTKETPFT NLIHSPPRLS CPTLSRSLQN SPLHHRRQFS PPPSPPSPTK LSDSDPQTTY HCASSVLRND
101: GQILSISLSS NGLVYTGSDS NLVRVWKLPE FTECGQLRTK ACRVVALQVS NDTVYAAYGD GKIRVWRRTW DKVLKHVRLA TIPKTLGYVR SYIAGKDKTM
201: HKGLITSMVI NTAEDILYTA SLDKTVKVWR ISDMKCIETI KAHTEPINAI IVADDGVLYT ASDDATVRVW RRNFCSHDQP HSLTVTLHAK YSPVKALTLT
301: PDAGILYGGC TDGYIHYWHK GWFAGQLQYG GSIQGHTHAV LCLASVAKYV VSGSADSTSR VWAREQDGQH TCLAVLVGHR GPIRCVTAFL GGRLLEDNED
401: SCCTICTGSL DGVFKLWRLT HNNHCSSPPG AKYFDLCKGL S

Best Arabidopsis Sequence Match ( AT1G49450.1 )
(BLAST)

001: MAIEENRSHN DYLRRMTFAA FLKSGSLAAE EETYHSDGDH HNQSTFSSNS DSQRPSNASS ASSDSSSPIY PLSPWNQTYY PSNDNTTSFS SVTQSPWNQT
101: YSPYHKSPWI YQTRNSDFED DPDNGLIGTV VRQEGHVYSL AASGDLLFTG SDSKNIRVWK DLKDFSGFKS TSGFVKAIVV TRDNRVFTGH QDGKIRVWRG
201: SKKNPEKYSR VGSLPTLKEF LTKSVNPRNY VEVRRRKNVL KIRHFDAVSC LSLNEDLGLL YSGSWDKTLK VWRLSDSKCL ESIEAHDDAV NTVVSGFDDL
301: VFTGSADGTL KVWKREVQGK EMKHVLVQVL MKQENAVTAL AVNLTDAVVY CGSSDGTVNF WERQKYLTHK GTIHGHRMAV LCLATAGSLL LSGGADKNIC
401: VWKRNGDGSH TCLSVLMDHE GPVKCLAAVE EAEEDHNDGD DGGEKGDQRW IVYSGSLDNS VKVWRVTDYA S

Arabidopsis Description

F13F21.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9XIB2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.