CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
cytosol 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57017	Soybean	plastid	85.22	87.82
KRH63468	Soybean	plastid	65.52	63.64
KRH54449	Soybean	plastid	65.76	63.42
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	61.08	61.08
PGSC0003DMT400062862	Potato	cytosol	53.45	55.08
AT5G50120.1	Thale cress	nucleus	50.99	53.35
CDY21432	Canola	cytosol, nucleus, plastid	50.74	53.09
Bra000611.1-P	Field mustard	nucleus	50.49	52.7
KRH74694	Soybean	nucleus	55.42	51.96
CDY70872	Canola	nucleus	48.03	50.65
KRH69465	Soybean	nucleus	54.68	50.57
Solyc03g113850.1.1	Tomato	cytosol, plastid	54.93	47.05
GSMUA_Achr6P36100_001	Banana	cytosol	45.07	46.56
GSMUA_Achr7P19910_001	Banana	cytosol	48.03	44.32
HORVU7Hr1G039810.1	Barley	plastid	41.63	44.01
TraesCS7B01G100800.1	Wheat	cytosol	40.89	43.01
Os02t0740900-01	Rice	plastid	43.1	43.0
KRH57169	Soybean	cytosol, plasma membrane	35.47	42.23
KRH43090	Soybean	plastid	43.84	41.3
Zm00001d017994_P001	Maize	cytosol	35.96	41.01
EES07284	Sorghum	cytosol	43.84	40.83
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	39.9	40.6
KRH03884	Soybean	cytosol	36.21	39.1
TraesCS7A01G195200.1	Wheat	cytosol	42.12	34.34
TraesCS7D01G196700.1	Wheat	cytosol	41.63	34.0
KRH39863	Soybean	cytosol, plastid	32.02	31.25
KRH05757	Soybean	nucleus	35.22	30.69
KRH15278	Soybean	cytosol	27.34	30.49
KRH28540	Soybean	nucleus	32.76	29.04
KRH76925	Soybean	nucleus	32.51	28.7
KRH62060	Soybean	cytosol	26.85	26.27
KRH52729	Soybean	cytosol	29.56	26.26
KRH23424	Soybean	plastid	28.08	25.85
KRH09907	Soybean	cytosol, plastid	13.79	21.46
KRH24543	Soybean	cytosol, nucleus	32.27	17.35

Protein Annotations

EntrezGene:100794737	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02010345	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_17G093400
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1MTL3	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	EnsemblPlants:KRH03365	ProteinID:KRH03365	ProteinID:KRH03365.1	PFAM:PF00400	PRINTS:PR00320
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF278	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000233E81C	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:7287962..7289636

Molecular Weight (calculated)

44812.2 Da

IEP (calculated)

9.863

GRAVY (calculated)

-0.252

Length

406 amino acids

Sequence
(BLAST)

001: MEHSTSFNDS NNSLSSQRSL VSVPSLNSHS QFLTPSTTSH TCLTTLKFLT SSSVYISSLT LAGKFLYAGS SDREIRSWNH THFIQNQKPT TTTTTTTTNN
101: NNNSVVIAGK GAVKSIVVHS DKLFTAHQDN KIRVWKVTNL SHDHQKYTRV ATLPTLADRV TKLLVPKNHV RIRRHKKCTW VHHVDTVSSI ALSQDGNFLY
201: SVSWDRTIKV WRTKDLACLE SVRNAHDDAI NAVAVSYDGH VYTGSADKRI RVWKKLEGEK KLSLVDTLEK HNSGINALAL KSDGSVLYSG ACDRSILVSE
301: KGENGKLLVV GALRGHAKSI LCLAVVSDLV CSGSEDKTVR IWRGVQKDEY SCLAVLEGHR SPIKSITAAL DLSQDPSSQA TSFLLYSASL DSHVKLWQLF
401: LPLLST

Best Arabidopsis Sequence Match ( AT5G50120.1 )
(BLAST)

001: MIQFQESEEE PDFSQEDHLT SSSQPLHQCI ATLVCHTASY ISSLTLAGKR LYTGSNDGVV RLWNANTLET LAEASSNGDV ITGERGGGGA VKSLVILADK
101: LFTAHQDHKI RVWKINDVVE EDVGGKKYMH LATMPTISDR FAKCLMPKNQ VEIRRHKKAS WVHHVDAVSG LALSRDGTLL YSVSWDRTLK IWRTTDFKCL
201: ESFTNAHDDA INAVALSENG DIYTGSSDQR IKVWRKNINE ENVKKKRKHS LVAILSEHNS GINALALSGT NGSLLHSGGS DGSILVWERD DGGDIVVVGM
301: LRGHTESVLC LAVVSDILCS GSADKTVRLW KCSAKDYSCL AMLEGHLGPV KCLTGAFRDS RKADEASYHI YSGGLDSQVK VWQVLVPA

Arabidopsis Description

Similarity to GTP-binding regulatory protein and WD-repeat protein [Source:UniProtKB/TrEMBL;Acc:Q9FG99]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.