Factsheet for TraesCS7D01G196700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G100800.1	Wheat	cytosol	72.43	93.26
TraesCS7A01G195200.1	Wheat	cytosol	93.16	92.97
HORVU7Hr1G039810.1	Barley	plastid	71.23	92.19
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	52.11	64.91
GSMUA_Achr6P36100_001	Banana	cytosol	40.85	51.65
GSMUA_Achr7P19910_001	Banana	cytosol	40.04	45.23
KRH57017	Soybean	plastid	35.01	44.16
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	34.81	42.61
Bra024637.1-P	Field mustard	plastid	34.81	42.4
CDY21432	Canola	cytosol, nucleus, plastid	33.0	42.27
CDY14665	Canola	plastid	34.61	42.26
CDY16242	Canola	plastid	34.61	42.05
AT1G24130.1	Thale cress	cytosol, plastid	35.01	41.93
KRH03365	Soybean	nucleus, plastid	34.0	41.63
CDY70872	Canola	nucleus	32.19	41.56
VIT_01s0026g00880.t01	Wine grape	cytosol	35.61	41.45
Bra000611.1-P	Field mustard	nucleus	32.39	41.39
AT5G50120.1	Thale cress	nucleus	32.19	41.24
KRH63468	Soybean	plastid	34.0	40.43
KRH54449	Soybean	plastid	34.0	40.14
PGSC0003DMT400062862	Potato	cytosol	31.59	39.85
Solyc05g006340.2.1	Tomato	cytosol	33.2	39.76
KRH74694	Soybean	nucleus	34.21	39.26
PGSC0003DMT400004842	Potato	plastid	33.4	38.52
Solyc04g005020.2.1	Tomato	plastid	33.2	38.46
PGSC0003DMT400040333	Potato	cytosol	33.2	38.28
KRH69465	Soybean	nucleus	33.4	37.81
TraesCS2D01G338900.1	Wheat	plastid	32.39	36.43
Solyc03g113850.1.1	Tomato	cytosol, plastid	32.19	33.76
TraesCS5D01G074900.1	Wheat	cytosol	27.16	30.0
TraesCS5D01G389000.1	Wheat	cytosol	28.37	29.68
TraesCS4D01G071100.1	Wheat	plastid	27.77	29.05
TraesCS3D01G480400.1	Wheat	plastid	24.75	28.74
TraesCS4D01G071000.1	Wheat	plastid	27.36	28.1
TraesCS3D01G163800.1	Wheat	cytosol	22.54	22.18

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22844	PANTHER:PTHR22844:SF321	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS7D01G196700	EnsemblPlants:TraesCS7D01G196700.1
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:153310435..153314664

Molecular Weight (calculated)

52822.9 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.154

Length

497 amino acids

Sequence
(BLAST)

001: MEKSAKCTRD EATACSPSPC PCPVPIVHRI AALYCKLGAP TGARRLIEGA SRGEAEGGCK KVLQLHEEIP AASSRNPFSL QESCPHNLTR FQPKREEILK
101: HFADKNSKAR SSMSLNSEEG LMCEAISHSS QSSAPSPLPL SPCHYQCVST LRGHSSYVSG LAVDGNSLYV ASSDGHIRLW PLDMGGTAVQ QEGSVVAVTN
201: SSIKCLMATS DGLVTAHQDG KIRVWQHAGR RKGGSSHLAL HGVLPTTADC LRTFLFPKNY VDVRRHTSRT WVHHVDAVTA LALSPDGGYM YSVSWDRSLK
301: VWRLPSLRCV ESIAPAHNDA INAVAVSSDG SVYTGSADRT IKAWRRPPGQ KRLVLVGTME RHRSAVNALA MGVGGLVLYS GSCDRSVVVW EGFDAGGVAA
401: TRTLRGHAEA VLCLAAAGDV ACSGSADRTV MVWRRGAEGE YSCSAVLGGH GAAVKSLALV LTGGDHGSER EESPRGGCSA LICSGSLDCD VKIWRVT

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.