Factsheet for TraesCS3D01G163800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G182500.1	Wheat	cytosol	99.6	99.6
TraesCS3A01G156000.1	Wheat	cytosol	99.6	99.41
HORVU3Hr1G031720.2	Barley	cytosol	98.61	98.22
Os01t0232200-00	Rice	cytosol	84.36	81.14
Zm00001d009003_P001	Maize	cytosol	82.57	80.19
EES02188	Sorghum	cytosol	82.97	77.88
Zm00001d039292_P001	Maize	cytosol	81.78	77.34
GSMUA_Achr10P...	Banana	nucleus	43.96	47.23
VIT_04s0008g03540.t01	Wine grape	cytosol	41.39	46.65
KRH52729	Soybean	cytosol	40.79	45.08
KRH62060	Soybean	cytosol	36.83	44.82
PGSC0003DMT400024834	Potato	cytosol	40.2	42.74
VIT_09s0002g04040.t01	Wine grape	nucleus	37.62	42.41
VIT_09s0002g04050.t01	Wine grape	cytosol	35.84	40.4
TraesCS5D01G074900.1	Wheat	cytosol	28.12	31.56
TraesCS4D01G071100.1	Wheat	plastid	28.71	30.53
TraesCS5D01G389000.1	Wheat	cytosol	28.51	30.32
TraesCS4D01G071000.1	Wheat	plastid	28.91	30.17
TraesCS3D01G480400.1	Wheat	plastid	22.77	26.87
TraesCS2D01G338900.1	Wheat	plastid	20.2	23.08
TraesCS7D01G196700.1	Wheat	cytosol	22.18	22.54

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF213	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS3D01G163800
EnsemblPlants:TraesCS3D01G163800.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

No Description!

Coordinates

chr3D:-:135043637..135045154

Molecular Weight (calculated)

53605.6 Da

IEP (calculated)

7.453

GRAVY (calculated)

-0.172

Length

505 amino acids

Sequence
(BLAST)

001: MDFGRRKSFS FFEEDRKARP AAAQTPVHHY ARGGGGGGGG GRSPAREAAE PARMSMSSVP VAELPAMMGV GGVGGGCSPW VQSPLHSRLR FPPSPAAIYH
101: CLAALHRLDG DVHALAVARG VLFTASDSGR VRAWAAPGCF NRGYLDVGRG RVPALAACGG TLVTSHSRDH HVRVWTVCAA AVCDHIRAKK AATLPAKGGL
201: LSFAKKRPHH HRDTVSCLVL HAVAGLLYTA SHDQTVKAWK LSDGSCVDSF VAHDGPINAM LVNEADGCIF TGSADGTVKM WRRVYGGTAH ALIIVLRSEL
301: SPVNALTICH AASGTTRRCF LYAGSSDGYV NIWEKEASAG RPVHVGFLKG HRLAVFCLTS GCGGRVVVSG SEDATMRVWR REGKGGESHT CLAVIEGHRG
401: PVRCLAVGGG EAGEVEGSMV VYSAGLDKSV KVWRIRVVGK EEEDDEDDED DDGEEEMEDI VAAGKGDVDA VRDEVEAEEE QVVSLGPTPV LSPVWVEKRR
501: HTSRG

Best Arabidopsis Sequence Match ( AT1G47610.1 )
(BLAST)

001: MPRSDLTRGY SDGDSLVGEI VREEGHIYSL AATNDLLYTG SDNNYIRVWK NLNEFSGFKS NSGLVKAIVI SREAKVFTGH QDGKIRVWKT SSKNPRVYTR
101: AGSLPALKDV LKSSVKPSNY VEVRRCRTAL WIKHSDAVSC LSLAEDQGLL YSASWDRTVK VWRIHDLKCI ESIKAHDDAV NSVTTAESLV FTGSADGTVK
201: VWKREIRGKR TAHSLFQTLL KQESAVTALV TSHMAVYSGS SDGAVNFWEM GDKKLLKHCE VFKKHRLAVL CIAAAGKLLF SGAADKKICV WRREGKVHTC
301: VSVLTGHTGP VKCLAVVEPS GGEEEDGGDG RLVLYSGSLD KSVKVWRVPR H

Arabidopsis Description

F16N3.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SX94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.