Factsheet for TraesCS2D01G338900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G324000.1	Wheat	plastid	95.93	95.71
TraesCS2B01G358100.1	Wheat	plastid	95.48	94.41
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	93.67	92.2
Zm00001d025699_P001	Maize	plastid	74.89	73.23
Zm00001d003272_P001	Maize	cytosol, plastid	74.21	72.73
KXG26570	Sorghum	cytosol, plastid	75.57	70.91
Os04t0481600-00	Rice	cytosol	78.96	67.5
Bra032795.1-P	Field mustard	cytosol	33.48	47.9
GSMUA_Achr9P07610_001	Banana	nucleus	43.21	46.93
GSMUA_Achr3P17140_001	Banana	cytosol	44.8	44.59
CDY24427	Canola	plastid	37.78	39.57
CDY36134	Canola	plastid	37.56	39.34
Bra010967.1-P	Field mustard	cytosol, plastid	37.33	39.1
CDY51591	Canola	cytosol, mitochondrion	36.88	39.0
KRH43090	Soybean	plastid	38.01	38.98
Bra012504.1-P	Field mustard	cytosol, mitochondrion	36.65	38.76
CDX84954	Canola	plastid	36.88	38.63
CDY03879	Canola	cytosol, mitochondrion	36.43	38.52
KRH57169	Soybean	cytosol, plasma membrane	29.64	38.42
GSMUA_Achr8P28630_001	Banana	cytosol	44.57	38.33
AT1G24530.1	Thale cress	cytosol, plastid	35.97	38.04
VIT_01s0137g00360.t01	Wine grape	cytosol	36.65	37.5
CDY27587	Canola	plastid	36.65	37.24
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	33.26	36.75
Solyc05g013880.1.1	Tomato	cytosol, plastid	35.29	36.71
PGSC0003DMT400043704	Potato	plastid	35.07	35.55
KRH03884	Soybean	cytosol	29.64	34.84
TraesCS7D01G196700.1	Wheat	cytosol	36.43	32.39
Solyc03g111780.1.1	Tomato	cytosol	28.73	31.67
TraesCS5D01G074900.1	Wheat	cytosol	28.73	28.22
TraesCS3D01G480400.1	Wheat	plastid	26.92	27.8
TraesCS5D01G389000.1	Wheat	cytosol	29.41	27.37
TraesCS4D01G071100.1	Wheat	plastid	28.96	26.95
TraesCS4D01G071000.1	Wheat	plastid	28.51	26.03
TraesCS3D01G163800.1	Wheat	cytosol	23.08	20.2

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS2D01G338900	EnsemblPlants:TraesCS2D01G338900.1	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200	SEG:seg	:

Description

No Description!

Coordinates

chr2D:-:432079742..432081070

Molecular Weight (calculated)

45786.0 Da

IEP (calculated)

9.930

GRAVY (calculated)

-0.020

Length

442 amino acids

Sequence
(BLAST)

001: MKLLPRLCMA TTSAAAGESD ASSNKLASVA STSSSTVSTS SSAAAAAVSE ASSSTSLPSL SAATSNAASF AHVATLLPPP TAAAAAAAVA VVDASRGFVV
101: ARPASVAFHD LCTLEPTSTS DPGHDTATAG SVKCVAHVHG GKAVTGHQDG RLRLWRASSR APARIRLAAA LPTVSDRLRR FPLPSNHVAV RRHHRRLWIE
201: HADTVSGVAA STDGRLLFSV SWDKTLKVWA IPSLRCLQSL PAHDDAVNAV AVAPDGTVYT GSADRRVRVW APKPASDKTA KRQSKKPVYY LVATLSRHTA
301: AVNAVAVGCA GQVLYSGGND RCVVVWERED SASHMVAIGA LRGHRKAVLS VACAGDGLVV SGSADHTVRA WRRETDGRGH TCVAVIDGHG SAVRSVAVAL
401: VPGKKQLQGG DDGDDGGEEW RVCSASFDGE VRVWSLRVTT GL

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.