CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03884	Soybean	cytosol	88.86	80.59
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	57.18	48.75
Solyc03g111780.1.1	Tomato	cytosol	53.08	45.14
KRH43090	Soybean	plastid	52.79	41.76
GSMUA_Achr9P07610_001	Banana	nucleus	46.92	39.31
KRH57017	Soybean	plastid	43.4	37.56
KRH03365	Soybean	nucleus, plastid	42.23	35.47
GSMUA_Achr3P17140_001	Banana	cytosol	45.75	35.14
KRH74694	Soybean	nucleus	42.52	33.49
KRH54449	Soybean	plastid	40.76	33.02
KRH63468	Soybean	plastid	40.18	32.78
KRH69465	Soybean	nucleus	41.64	32.35
Zm00001d003272_P001	Maize	cytosol, plastid	40.76	30.82
KXG26570	Sorghum	cytosol, plastid	42.23	30.57
KRH39863	Soybean	cytosol, plastid	36.66	30.05
TraesCS2B01G358100.1	Wheat	plastid	39.3	29.98
Zm00001d025699_P001	Maize	plastid	39.59	29.87
GSMUA_Achr8P28630_001	Banana	cytosol	44.87	29.77
TraesCS2D01G338900.1	Wheat	plastid	38.42	29.64
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	38.71	29.4
TraesCS2A01G324000.1	Wheat	plastid	38.12	29.35
KRH05757	Soybean	nucleus	39.3	28.76
KRH15278	Soybean	cytosol	29.91	28.02
KRH28540	Soybean	nucleus	36.66	27.29
KRH76925	Soybean	nucleus	36.66	27.17
Os04t0481600-00	Rice	cytosol	39.3	25.92
KRH52729	Soybean	cytosol	31.67	23.63
KRH62060	Soybean	cytosol	28.45	23.37
KRH23424	Soybean	plastid	29.33	22.68
KRH09907	Soybean	cytosol, plastid	13.49	17.62
KRH24543	Soybean	cytosol, nucleus	36.36	16.42

Protein Annotations

EntrezGene:100784592	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02002814	InterPro:G-protein_beta_WD-40_rep	EnsemblPlantsGene:GLYMA_05G043500
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1K066	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	EnsemblPlants:KRH57169	ProteinID:KRH57169	ProteinID:KRH57169.1	PFAM:PF00400	PRINTS:PR00320
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0002339F98	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:3880732..3881757

Molecular Weight (calculated)

37617.0 Da

IEP (calculated)

9.600

GRAVY (calculated)

-0.143

Length

341 amino acids

Sequence
(BLAST)

001: MNDSTNYCVA SLKTVTAHIT CLAVHRNLLY AASLNLINVF DLISHYSHID AFNQSSTSGF VKSITFTNSK VFTAHQDRKI RVWLITPSKR HRLLSSLPTV
101: TDRLRRCIVP RNYVTVRRHK TRLWIQHCDT VSGLAVNQRF MYSVSWDRSF KVWDLLSYRC LESVKAHEDA INAVAVNGDG TVYTASADGS IKIWRREGEA
201: KRHKLVSTTG RRKSTVNALA LDGGGGAGLF SGGCDGEICR WECGKNGVVK METLRGHGGA ILCLIHVAGL LASASADLTV RIWRRERESS GDGGYCCRAV
301: LEGHEKPVKS LVAFSDGEGD SNGVVTLFSG SLDGEIRVWR V

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.