CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032795.1-P	Field mustard	cytosol	46.87	65.37
CDY03879	Canola	cytosol, mitochondrion	57.54	59.33
CDY51591	Canola	cytosol, mitochondrion	57.54	59.33
CDX84954	Canola	plastid	58.0	59.24
Bra012504.1-P	Field mustard	cytosol, mitochondrion	57.31	59.09
AT1G24530.1	Thale cress	cytosol, plastid	57.08	58.85
CDY36134	Canola	plastid	57.54	58.77
CDY24427	Canola	plastid	57.31	58.53
VIT_01s0137g00360.t01	Wine grape	cytosol	58.47	58.33
Bra010967.1-P	Field mustard	cytosol, plastid	57.08	58.29
CDY27587	Canola	plastid	57.77	57.24
Solyc05g013880.1.1	Tomato	cytosol, plastid	54.99	55.76
PGSC0003DMT400043704	Potato	plastid	54.52	53.9
KRH57169	Soybean	cytosol, plasma membrane	41.76	52.79
KRH03884	Soybean	cytosol	41.76	47.87
KRH57017	Soybean	plastid	43.62	47.72
GSMUA_Achr9P07610_001	Banana	nucleus	43.16	45.7
KRH03365	Soybean	nucleus, plastid	41.3	43.84
KRH63468	Soybean	plastid	42.46	43.78
GSMUA_Achr3P17140_001	Banana	cytosol	45.01	43.69
KRH54449	Soybean	plastid	42.46	43.47
KRH74694	Soybean	nucleus	42.92	42.73
KRH69465	Soybean	nucleus	42.0	41.23
Zm00001d003272_P001	Maize	cytosol, plastid	39.91	38.14
TraesCS2D01G338900.1	Wheat	plastid	38.98	38.01
TraesCS2A01G324000.1	Wheat	plastid	38.52	37.47
TraesCS2B01G358100.1	Wheat	plastid	38.75	37.36
Zm00001d025699_P001	Maize	plastid	38.75	36.95
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	38.28	36.75
KXG26570	Sorghum	cytosol, plastid	40.14	36.73
GSMUA_Achr8P28630_001	Banana	cytosol	42.92	35.99
Os04t0481600-00	Rice	cytosol	38.28	31.91
KRH15278	Soybean	cytosol	26.22	31.04
KRH39863	Soybean	cytosol, plastid	29.93	31.01
KRH05757	Soybean	nucleus	32.95	30.47
KRH28540	Soybean	nucleus	31.32	29.48
KRH76925	Soybean	nucleus	31.09	29.13
KRH52729	Soybean	cytosol	29.23	27.57
KRH62060	Soybean	cytosol	26.22	27.23
KRH23424	Soybean	plastid	25.52	24.94
KRH09907	Soybean	cytosol, plastid	12.53	20.69
KRH24543	Soybean	cytosol, nucleus	31.09	17.75

Protein Annotations

EntrezGene:100817776	Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A0R0IPT6	EMBL:ACUP02004847	InterPro:G-protein_beta_WD-40_rep
EnsemblPlantsGene:GLYMA_08G130300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	EnsemblPlants:KRH43090	ProteinID:KRH43090	ProteinID:KRH43090.1	PFAM:PF00400	PRINTS:PR00320
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI00023385B9	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:10010051..10012167

Molecular Weight (calculated)

47721.2 Da

IEP (calculated)

8.495

GRAVY (calculated)

-0.289

Length

431 amino acids

Sequence
(BLAST)

001: MRIQWWLNTC SSANCATATH HSTISLPKQK EHACDDSISY SSISEAPASS TTSNNSTSSL ESNLSIQTLP SVPSLQSLSP QNFTFSVSHH CVTTLEPHLS
101: RPVTSLAVNN NLLYAATDHE INVYDRHTCT TIHAFNTQPT STSNSTKTIA FSNNNTVITT HQDCKIRVWQ NHKNIHHRML ATLPTVNDRL HRFLLPKNYV
201: AIRRHEKRLW IEHADAVTGL AVSNGAIYSV SWDRTLKIWR LSDFRCVESL KAHEDAVNAV AVSNDGTVYT GSADKRIRVW ARPAGEKRHV LVATLEKHKS
301: AVNALALNDD ASVLFSGACD RSILVWERED SANHMVVSGA LRGHQKAILC LVNVSDLLFS GSADRTVRIW KRAYDGRYGC LAVLDGHRKP VKSLAAIPEE
401: YDQTSPKCSV SVFSGSLDGE IKVWQVSITS Q

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.