Factsheet for TraesCS2A01G324000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G338900.1	Wheat	plastid	95.71	95.93
TraesCS2B01G358100.1	Wheat	plastid	95.49	94.63
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	92.55	91.31
Zm00001d025699_P001	Maize	plastid	74.94	73.45
Zm00001d003272_P001	Maize	cytosol, plastid	72.69	71.4
KXG26570	Sorghum	cytosol, plastid	74.94	70.49
Os04t0481600-00	Rice	cytosol	77.88	66.73
Bra032795.1-P	Field mustard	cytosol	32.73	46.93
GSMUA_Achr9P07610_001	Banana	nucleus	41.99	45.7
GSMUA_Achr3P17140_001	Banana	cytosol	43.79	43.69
CDY24427	Canola	plastid	37.25	39.1
CDY36134	Canola	plastid	37.02	38.86
CDY51591	Canola	cytosol, mitochondrion	36.57	38.76
Bra010967.1-P	Field mustard	cytosol, plastid	36.79	38.63
Bra012504.1-P	Field mustard	cytosol, mitochondrion	36.34	38.52
KRH43090	Soybean	plastid	37.47	38.52
CDY03879	Canola	cytosol, mitochondrion	36.12	38.28
CDX84954	Canola	plastid	36.34	38.15
KRH57169	Soybean	cytosol, plasma membrane	29.35	38.12
AT1G24530.1	Thale cress	cytosol, plastid	35.89	38.04
GSMUA_Achr8P28630_001	Banana	cytosol	43.79	37.74
VIT_01s0137g00360.t01	Wine grape	cytosol	36.34	37.27
CDY27587	Canola	plastid	36.12	36.78
Solyc05g013880.1.1	Tomato	cytosol, plastid	35.21	36.71
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	32.73	36.25
PGSC0003DMT400043704	Potato	plastid	34.99	35.55
KRH03884	Soybean	cytosol	29.35	34.57
TraesCS7A01G195200.1	Wheat	cytosol	37.25	33.13
Solyc03g111780.1.1	Tomato	cytosol	28.44	31.42
TraesCS3A01G485100.1	Wheat	plastid	27.09	28.85
TraesCS5A01G063900.1	Wheat	cytosol	27.99	27.49
TraesCS5A01G379200.1	Wheat	cytosol	29.35	27.25
TraesCS4A01G242800.1	Wheat	plastid	28.67	27.25
TraesCS4A01G242900.1	Wheat	plastid	28.22	25.77
TraesCS3A01G156000.1	Wheat	cytosol	24.15	21.15

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
PFAM:PF00400	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320
SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS2A01G324000	EnsemblPlants:TraesCS2A01G324000.1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	TIGR:cd00200	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:554414948..554416279

Molecular Weight (calculated)

45909.1 Da

IEP (calculated)

10.219

GRAVY (calculated)

-0.051

Length

443 amino acids

Sequence
(BLAST)

001: MKLLPRLCMA TSSAAAAGDS DASSNKLASV ASTSSSTVST SSSAAAAAVS EASSSTSLPS LSTATSNAAS FAHVATLLPP PTAASAAAAV AVVDVSRGFV
101: VARPASVALH DLGTLEPTST SDPGHDTATA GSVKCVAHVH GGKAVTGHQD GRLRLWRVSS RAPARIRLAA ALPTVSDRLR RFPLPSNHVA VRRHHRRLWI
201: EHADTVSGVA ASTDGRLLFS VSWDKTLKVW AIPSLRCLQS LPAHDDAVNA VAVAPDGTVY TGSADRRVRV WAPRPASDKT TKRQSKKPVY YLAATLSRHT
301: AAVNAVAVGC GGQVLYSGGN DRCVVVWERE DSASHMVAIG ALRGHRKAVL SIASTGGGLV VSGSADHTVR AWRRETDGRG HTCVAVIDGH GSAVRSVAVA
401: LVPGKKQLQG GEDGDDGGEE WRVCSASFDD EVRVWSLRVT TGL

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.