CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84954	Canola	plastid	92.87	95.73
Bra032795.1-P	Field mustard	cytosol	67.82	95.47
CDY51591	Canola	cytosol, mitochondrion	86.9	90.43
CDY36134	Canola	plastid	87.59	90.28
CDY03879	Canola	cytosol, mitochondrion	86.44	89.95
CDY24427	Canola	plastid	86.67	89.34
AT1G24530.1	Thale cress	cytosol, plastid	84.14	87.56
KRH43090	Soybean	plastid	57.24	57.77
VIT_01s0137g00360.t01	Wine grape	cytosol	56.55	56.94
Solyc05g013880.1.1	Tomato	cytosol, plastid	51.95	53.18
PGSC0003DMT400043704	Potato	plastid	51.95	51.83
GSMUA_Achr9P07610_001	Banana	nucleus	42.99	45.95
CDY14665	Canola	plastid	42.07	44.96
CDY16242	Canola	plastid	42.07	44.74
GSMUA_Achr3P17140_001	Banana	cytosol	44.83	43.92
CDY21432	Canola	cytosol, nucleus, plastid	36.32	40.72
CDY70872	Canola	nucleus	34.25	38.7
CDY06729	Canola	cytosol	31.49	37.74
CDX95477	Canola	cytosol	31.95	37.37
CDY70402	Canola	cytosol	31.03	37.29
Zm00001d025699_P001	Maize	plastid	38.62	37.17
TraesCS2D01G338900.1	Wheat	plastid	37.24	36.65
Zm00001d003272_P001	Maize	cytosol, plastid	37.7	36.36
TraesCS2A01G324000.1	Wheat	plastid	36.78	36.12
TraesCS2B01G358100.1	Wheat	plastid	37.01	36.02
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	36.78	35.63
GSMUA_Achr8P28630_001	Banana	cytosol	42.07	35.6
KXG26570	Sorghum	cytosol, plastid	38.16	35.24
CDX78047	Canola	plastid	31.49	32.78
CDX92289	Canola	cytosol	33.79	32.1
CDY23176	Canola	cytosol, plastid	31.26	32.08
CDX73675	Canola	cytosol, mitochondrion, plastid	31.26	32.08
CDX82320	Canola	nucleus	33.79	32.03
CDY16499	Canola	nucleus	34.02	31.69
CDY48182	Canola	nucleus	32.64	31.63
CDY69149	Canola	cytosol	33.1	31.37
CDX99296	Canola	cytosol	32.87	31.36
CDX76704	Canola	cytosol	33.33	31.18
CDY11480	Canola	cytosol	33.33	31.18
CDX77053	Canola	cytosol	32.18	31.18
Os04t0481600-00	Rice	cytosol	37.01	31.14
CDX77246	Canola	nucleus	33.56	31.13
CDY18561	Canola	cytosol	32.64	30.74
CDY23013	Canola	cytosol	30.57	29.23
CDY02088	Canola	cytosol, mitochondrion, nucleus	30.34	29.07
CDY17780	Canola	cytosol	30.8	29.07
CDY52834	Canola	cytosol	30.8	29.0
CDX76276	Canola	cytosol	32.18	28.63
CDY46256	Canola	cytosol	32.18	28.63
CDX75426	Canola	cytosol	31.49	28.6
CDX69050	Canola	cytosol	31.03	28.54
CDY45305	Canola	cytosol	31.49	28.02
CDX72479	Canola	cytosol	31.49	28.02
CDX84804	Canola	nucleus	11.95	20.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A078GR12	EnsemblPlants:CDY27587	ProteinID:CDY27587	ProteinID:CDY27587.1
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00038325001	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EF33FA	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

BnaA09g28200DBnaA09g28200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR12]

Coordinates

chrLK032207:-:164198..166698

Molecular Weight (calculated)

48037.9 Da

IEP (calculated)

9.896

GRAVY (calculated)

-0.357

Length

435 amino acids

Sequence
(BLAST)

001: MRIISRLFES EDSYRRKRTQ KSPKHLDSTD SATSSPLSEA TGSSSLHSSL SLQTLPSVPS LQKIPSETFA VTVSHSVTSS FKLRERSLPV TCLAVNGGYL
101: FAVSGHEVSI YDRDMCAHLD SFNGHDPFSG SVKSVGFSGD KIFTAHQDGK IGVWKLTAKN GYKQLTTLPT LNDRLRRFAL PKNYVQVRRH RKCLWIEHAD
201: AVSALAVNNG FIYSVSWDKT LKIWRASDLR CKESIKAHDD AVNAVAVSAN GTVYTGSADR RIRVWAKPAD SKRHELVATL EKHKSAVNAL ALNDDGSVLF
301: SGSCDRSILV WEREDSSNYM TVRGALRGHD KAILSLFNVS DLLISGSADR TVRIWRRGID GSYSCLEVLS GHTKPVKSLA AVKDSESDGV VSIVSGSLDG
401: EVKCWKVSKT WKTRQIKQGA TYENRTKMDH INCNL

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.