CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015611.1-P	Field mustard	cytosol	99.45	99.45
CDY70402	Canola	cytosol	97.25	97.51
AT1G47610.1	Thale cress	cytosol	85.67	88.6
CDX95477	Canola	cytosol	59.23	57.8
GSMUA_Achr3P30740_001	Banana	cytosol	53.72	55.71
CDY48182	Canola	nucleus	66.12	53.45
CDX77053	Canola	cytosol	65.56	53.01
CDX76704	Canola	cytosol	65.29	50.97
CDY11480	Canola	cytosol	65.29	50.97
CDY18561	Canola	cytosol	60.88	47.84
CDY69149	Canola	cytosol	60.06	47.49
CDX92289	Canola	cytosol	59.78	47.38
CDX82320	Canola	nucleus	59.78	47.28
TraesCS5D01G389000.1	Wheat	cytosol	61.71	47.16
TraesCS5B01G382700.1	Wheat	cytosol	61.71	47.16
CDX99296	Canola	cytosol	59.23	47.15
CDX77246	Canola	nucleus	60.88	47.12
TraesCS5A01G379200.1	Wheat	cytosol	61.71	46.96
HORVU5Hr1G093830.1	Barley	cytosol	61.71	46.76
CDY16499	Canola	nucleus	59.5	46.25
Os03t0738700-01	Rice	plasma membrane	61.16	45.4
EER93490	Sorghum	cytosol, endoplasmic reticulum, nucleus	60.33	45.06
CDY52834	Canola	cytosol	57.02	44.81
CDY02088	Canola	cytosol, mitochondrion, nucleus	55.92	44.71
CDY17780	Canola	cytosol	56.75	44.69
CDY23013	Canola	cytosol	55.92	44.62
CDX69050	Canola	cytosol	57.3	43.97
CDX75426	Canola	cytosol	57.58	43.63
GSMUA_Achr4P10690_001	Banana	cytosol, endoplasmic reticulum, plastid	44.63	43.43
CDY45305	Canola	cytosol	57.3	42.54
CDX72479	Canola	cytosol	57.02	42.33
CDY46256	Canola	cytosol	57.02	42.33
CDX76276	Canola	cytosol	56.47	41.92
GSMUA_Achr6P20880_001	Banana	cytosol	42.7	39.54
GSMUA_AchrUn_...	Banana	nucleus	43.25	39.45
CDY14665	Canola	plastid	41.87	37.35
CDY16242	Canola	plastid	41.32	36.67
GSMUA_Achr4P07470_001	Banana	endoplasmic reticulum, plasma membrane	49.31	35.94
CDY21432	Canola	cytosol, nucleus, plastid	36.91	34.54
CDX78047	Canola	plastid	39.67	34.45
CDX73675	Canola	cytosol, mitochondrion, plastid	39.94	34.2
CDY70872	Canola	nucleus	35.54	33.51
CDY23176	Canola	cytosol, plastid	39.12	33.49
CDX84804	Canola	nucleus	23.97	33.46
CDX84954	Canola	plastid	37.74	32.46
CDY36134	Canola	plastid	37.47	32.23
CDY03879	Canola	cytosol, mitochondrion	36.91	32.06
CDY51591	Canola	cytosol, mitochondrion	36.64	31.82
CDY24427	Canola	plastid	36.91	31.75
CDY27587	Canola	plastid	37.74	31.49
GSMUA_Achr4P03080_001	Banana	mitochondrion, nucleus, peroxisome, plasma membrane	50.41	28.59

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EnsemblPlants:CDY06729	ProteinID:CDY06729	ProteinID:CDY06729.1	InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00122916001	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF128	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EECAA1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

BnaA10g05080D

Coordinates

chrLK031972:-:578054..579145

Molecular Weight (calculated)

40019.7 Da

IEP (calculated)

9.497

GRAVY (calculated)

-0.317

Length

363 amino acids

Sequence
(BLAST)

001: MPRSDRAREY SWNQSEENSL VGSIVQEEGH IYSLAATNDL VFTGSDNNHI RVWKNLNEFS EFKSNSGLVK AIVICREDNN NKVFTGHQDG KIRVWKTSHK
101: NPRVYTRAGS LPALKDVLKK SVKPSNYVEV RRRRTALWIK HSDAVSCLSL VEDQGLLYSA SWDRTVKVWR IHDLQCLESI KAHDDAVNSV VAAGSGEGLV
201: FTGSADGTVK VWKREVRGKR TAHSLVQTLL KQESAVTALV TSHVAVYSGS SDGAVNYWEM GEKKVLKHCG VFKKHRLAVL CLAAAGELVF SGAADKKICV
301: WRREGRVHSC VSVLTGHTGP VKCLAVAEPS GGEGEDGGDG RLIVYSGSLD KSVKVWRVPC HHM

Best Arabidopsis Sequence Match ( AT1G47610.1 )
(BLAST)

001: MPRSDLTRGY SDGDSLVGEI VREEGHIYSL AATNDLLYTG SDNNYIRVWK NLNEFSGFKS NSGLVKAIVI SREAKVFTGH QDGKIRVWKT SSKNPRVYTR
101: AGSLPALKDV LKSSVKPSNY VEVRRCRTAL WIKHSDAVSC LSLAEDQGLL YSASWDRTVK VWRIHDLKCI ESIKAHDDAV NSVTTAESLV FTGSADGTVK
201: VWKREIRGKR TAHSLFQTLL KQESAVTALV TSHMAVYSGS SDGAVNFWEM GDKKLLKHCE VFKKHRLAVL CIAAAGKLLF SGAADKKICV WRREGKVHTC
301: VSVLTGHTGP VKCLAVVEPS GGEEEDGGDG RLVLYSGSLD KSVKVWRVPR H

Arabidopsis Description

F16N3.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SX94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.