Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015611.1-P | Field mustard | cytosol | 97.51 | 97.25 |
| CDY06729 | Canola | cytosol | 97.51 | 97.25 |
| AT1G47610.1 | Thale cress | cytosol | 84.53 | 87.18 |
| CDX95477 | Canola | cytosol | 58.29 | 56.72 |
| GSMUA_Achr3P30740_001 | Banana | cytosol | 53.31 | 55.14 |
| CDY48182 | Canola | nucleus | 65.19 | 52.56 |
| CDX77053 | Canola | cytosol | 64.64 | 52.12 |
| CDY11480 | Canola | cytosol | 64.92 | 50.54 |
| CDX76704 | Canola | cytosol | 64.92 | 50.54 |
| CDY18561 | Canola | cytosol | 59.94 | 46.97 |
| CDX82320 | Canola | nucleus | 59.12 | 46.62 |
| CDY69149 | Canola | cytosol | 59.12 | 46.62 |
| TraesCS5D01G389000.1 | Wheat | cytosol | 60.77 | 46.32 |
| TraesCS5B01G382700.1 | Wheat | cytosol | 60.77 | 46.32 |
| CDX92289 | Canola | cytosol | 58.56 | 46.29 |
| CDX99296 | Canola | cytosol | 58.29 | 46.27 |
| CDX77246 | Canola | nucleus | 59.94 | 46.27 |
| TraesCS5A01G379200.1 | Wheat | cytosol | 60.77 | 46.12 |
| HORVU5Hr1G093830.1 | Barley | cytosol | 60.77 | 45.93 |
| CDY16499 | Canola | nucleus | 58.56 | 45.4 |
| Os03t0738700-01 | Rice | plasma membrane | 60.22 | 44.58 |
| CDY02088 | Canola | cytosol, mitochondrion, nucleus | 55.52 | 44.27 |
| EER93490 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 59.39 | 44.24 |
| CDY23013 | Canola | cytosol | 55.52 | 44.18 |
| CDY52834 | Canola | cytosol | 56.35 | 44.16 |
| CDY17780 | Canola | cytosol | 56.08 | 44.03 |
| CDX69050 | Canola | cytosol | 56.63 | 43.34 |
| CDX75426 | Canola | cytosol | 56.91 | 43.01 |
| GSMUA_Achr4P10690_001 | Banana | cytosol, endoplasmic reticulum, plastid | 44.2 | 42.9 |
| CDX72479 | Canola | cytosol | 56.91 | 42.13 |
| CDY45305 | Canola | cytosol | 56.91 | 42.13 |
| CDY46256 | Canola | cytosol | 56.35 | 41.72 |
| CDX76276 | Canola | cytosol | 56.08 | 41.51 |
| GSMUA_Achr6P20880_001 | Banana | cytosol | 42.54 | 39.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.09 | 39.2 |
| CDY14665 | Canola | plastid | 41.71 | 37.1 |
| CDY16242 | Canola | plastid | 41.16 | 36.43 |
| GSMUA_Achr4P07470_001 | Banana | endoplasmic reticulum, plasma membrane | 48.9 | 35.54 |
| CDY21432 | Canola | cytosol, nucleus, plastid | 37.02 | 34.54 |
| CDX78047 | Canola | plastid | 39.5 | 34.21 |
| CDX73675 | Canola | cytosol, mitochondrion, plastid | 39.78 | 33.96 |
| CDY70872 | Canola | nucleus | 35.64 | 33.51 |
| CDY23176 | Canola | cytosol, plastid | 38.95 | 33.25 |
| CDX84804 | Canola | nucleus | 23.2 | 32.31 |
| CDX84954 | Canola | plastid | 37.29 | 31.99 |
| CDY36134 | Canola | plastid | 37.02 | 31.75 |
| CDY03879 | Canola | cytosol, mitochondrion | 36.46 | 31.58 |
| CDY24427 | Canola | plastid | 36.46 | 31.28 |
| CDY51591 | Canola | cytosol, mitochondrion | 35.91 | 31.1 |
| CDY27587 | Canola | plastid | 37.29 | 31.03 |
| GSMUA_Achr4P03080_001 | Banana | mitochondrion, nucleus, peroxisome, plasma membrane | 49.72 | 28.12 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A078JXP3 | EnsemblPlants:CDY70402 | ProteinID:CDY70402 | ProteinID:CDY70402.1 |
| InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00003156001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR22844 | PANTHER:PTHR22844:SF128 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EF3DAF | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : | : |
Description
BnaAnng33540DBnaAnng33540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXP3]
Coordinates
chrLK041995:+:1156..2244
Molecular Weight (calculated)
40082.8 Da
IEP (calculated)
9.709
GRAVY (calculated)
-0.347
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRSDRAREY SWNKSEENSL VGSIVQEEGN IYSLAATNDL VFTGSDNNHI RNWKNLNEFS EFKSNSGLVK AIVICREDNN KVFTGHQDGK IRVWKTSHKN
101: PRVYTRAGSL PALKDVLKKS VKPSNYVEVR RRRTALWIKH SDAVSCLSLV EDQGLLYSAS WDRTVKVWRI HDLKCLESIK AHDDAVNSVV AAGSGEGLVF
201: TGSAEGTVKV WKREVRGKRT AHSLVQTLLK QESAVTALVT SHVAVYSGSS DGAVNYWEMG EKKVLKHCGV FKKHRLAVLC LAAAGELVFS GAADKKICVW
301: RREGRVHSCV SVLTGHTGPV KCLAVAAPSG EEDEDGRDGR LIVYSGSLDK SVKVWRVPCH HM
101: PRVYTRAGSL PALKDVLKKS VKPSNYVEVR RRRTALWIKH SDAVSCLSLV EDQGLLYSAS WDRTVKVWRI HDLKCLESIK AHDDAVNSVV AAGSGEGLVF
201: TGSAEGTVKV WKREVRGKRT AHSLVQTLLK QESAVTALVT SHVAVYSGSS DGAVNYWEMG EKKVLKHCGV FKKHRLAVLC LAAAGELVFS GAADKKICVW
301: RREGRVHSCV SVLTGHTGPV KCLAVAAPSG EEDEDGRDGR LIVYSGSLDK SVKVWRVPCH HM
001: MPRSDLTRGY SDGDSLVGEI VREEGHIYSL AATNDLLYTG SDNNYIRVWK NLNEFSGFKS NSGLVKAIVI SREAKVFTGH QDGKIRVWKT SSKNPRVYTR
101: AGSLPALKDV LKSSVKPSNY VEVRRCRTAL WIKHSDAVSC LSLAEDQGLL YSASWDRTVK VWRIHDLKCI ESIKAHDDAV NSVTTAESLV FTGSADGTVK
201: VWKREIRGKR TAHSLFQTLL KQESAVTALV TSHMAVYSGS SDGAVNFWEM GDKKLLKHCE VFKKHRLAVL CIAAAGKLLF SGAADKKICV WRREGKVHTC
301: VSVLTGHTGP VKCLAVVEPS GGEEEDGGDG RLVLYSGSLD KSVKVWRVPR H
101: AGSLPALKDV LKSSVKPSNY VEVRRCRTAL WIKHSDAVSC LSLAEDQGLL YSASWDRTVK VWRIHDLKCI ESIKAHDDAV NSVTTAESLV FTGSADGTVK
201: VWKREIRGKR TAHSLFQTLL KQESAVTALV TSHMAVYSGS SDGAVNFWEM GDKKLLKHCE VFKKHRLAVL CIAAAGKLLF SGAADKKICV WRREGKVHTC
301: VSVLTGHTGP VKCLAVVEPS GGEEEDGGDG RLVLYSGSLD KSVKVWRVPR H
Arabidopsis Description
F16N3.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SX94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.