Factsheet for HORVU5Hr1G093830.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G379200.1	Wheat	cytosol	98.12	98.53
TraesCS5D01G389000.1	Wheat	cytosol	97.7	98.53
TraesCS5B01G382700.1	Wheat	cytosol	97.49	98.32
Os03t0738700-01	Rice	plasma membrane	87.68	85.89
EER93490	Sorghum	cytosol, endoplasmic reticulum, nucleus	86.43	85.19
AT1G47610.1	Thale cress	cytosol	45.51	62.11
Bra015611.1-P	Field mustard	cytosol	46.97	61.98
GSMUA_Achr3P30740_001	Banana	cytosol	45.09	61.71
CDY06729	Canola	cytosol	46.76	61.71
CDY70402	Canola	cytosol	45.93	60.77
VIT_18s0001g11600.t01	Wine grape	nucleus	57.2	60.09
CDY48182	Canola	nucleus	54.49	58.13
Bra034310.1-P	Field mustard	nucleus	54.49	58.13
CDX77053	Canola	cytosol	54.28	57.91
Bra007751.1-P	Field mustard	nucleus	53.65	57.11
GSMUA_Achr4P10690_001	Banana	cytosol, endoplasmic reticulum, plastid	44.47	57.1
Solyc04g079700.2.1	Tomato	cytosol	51.77	55.86
AT2G26490.1	Thale cress	cytosol	54.07	55.7
CDX76704	Canola	cytosol	53.86	55.48
CDY11480	Canola	cytosol	53.86	55.48
Solyc07g025140.2.1	Tomato	cytosol	51.15	55.43
PGSC0003DMT400008621	Potato	mitochondrion	49.69	55.35
KRH15278	Soybean	cytosol	41.75	54.95
KRH05757	Soybean	nucleus	53.44	54.94
PGSC0003DMT400016680	Potato	cytosol	50.94	54.71
PGSC0003DMT400039941	Potato	cytosol	45.93	54.05
Solyc12g088980.1.1	Tomato	cytosol	45.72	53.94
HORVU4Hr1G012000.11	Barley	plastid	45.72	45.62
GSMUA_Achr4P07470_001	Banana	endoplasmic reticulum, plasma membrane	46.35	44.58
GSMUA_Achr4P03080_001	Banana	mitochondrion, nucleus, peroxisome, plasma membrane	49.06	36.72
HORVU7Hr1G039810.1	Barley	plastid	28.81	35.94
HORVU5Hr1G017260.1	Barley	plastid	36.53	33.02
HORVU3Hr1G106030.1	Barley	plastid	28.6	31.42
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	27.14	28.95
HORVU3Hr1G031720.2	Barley	cytosol	30.48	28.8

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:AK377119	UniProt:F2ELU1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G093830	EnsemblPlants:HORVU5Hr1G093830.1	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF145	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000200907E	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2ELU1]

Coordinates

chrchr5H:+:593130812..593134115

Molecular Weight (calculated)

51138.8 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.346

Length

479 amino acids

Sequence
(BLAST)

001: MRDSDGEGAG GGLPRSHPSN IPLPMSHSDP NYSGTDDECS NRQSSSSATG GASPGFYNDY PSSFSGECSP YNMSPWNQTM ASPWSHHSEA SMAAPAMAPG
101: TSLISSLVRE EGHIYSLAAK GDALYTGSDS KNIRVWRKQK DSGGFKSSSG LVKAIVISGE RIFTGHQDGK IRVWKVSPKN GLHKRVGSLP RLRDFLRGSL
201: NPSNYVEVRK NRSALWIRHS DAVSCLSPTD AGQGLLYSGS WDRTFKVWRI SDSKCLESVV AHDDNVNAIV AAYDGLVFTG SADGTVKVWK REVQGKGTKH
301: SPVQTLLKQE HAVNALAVSA VAPVLYCGSS DGLVNCWEGD SKLVHGGVLR GHKKAVFCLA AAGALLFSGS ADNTIMVWRR DAGVHSCLSV LSGHTEPIRC
401: LAVVEYNKEN VAAAAAETGD NNGVGRWIVY SGSLDKSIKV WRVTDEPADM LLGGSGSEGS MFDRYPGDPF GASSSSSFR

Best Arabidopsis Sequence Match ( AT2G26490.1 )
(BLAST)

001: MFTEADSIPR AKYANMMHSD PNLSSTMTQQ TEEEYGIRNS SASAVGTGMY DRMSCEGSPM MMSPWNQATP FTQTQWSTVE ENLPQNGLIG SLVREEGHIY
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH

Arabidopsis Description

JGBProtein JINGUBANG [Source:UniProtKB/Swiss-Prot;Acc:O48716]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.