Factsheet for HORVU3Hr1G031720.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G156000.1	Wheat	cytosol	98.82	99.01
TraesCS3D01G163800.1	Wheat	cytosol	98.22	98.61
TraesCS3B01G182500.1	Wheat	cytosol	98.22	98.61
Os01t0232200-00	Rice	cytosol	84.81	81.9
Zm00001d009003_P001	Maize	cytosol	82.64	80.58
EES02188	Sorghum	cytosol	83.04	78.25
Zm00001d039292_P001	Maize	cytosol	81.85	77.72
GSMUA_Achr10P...	Banana	nucleus	44.18	47.66
VIT_04s0008g03540.t01	Wine grape	cytosol	41.22	46.65
KRH52729	Soybean	cytosol	40.83	45.3
KRH62060	Soybean	cytosol	36.88	45.06
PGSC0003DMT400024834	Potato	cytosol	40.04	42.74
VIT_09s0002g04040.t01	Wine grape	nucleus	37.67	42.63
VIT_09s0002g04050.t01	Wine grape	cytosol	35.7	40.4
HORVU5Hr1G093830.1	Barley	cytosol	28.8	30.48
HORVU4Hr1G012000.11	Barley	plastid	28.4	30.0
HORVU7Hr1G039810.1	Barley	plastid	22.68	29.95
HORVU3Hr1G106030.1	Barley	plastid	23.08	26.83
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	20.71	23.39
HORVU5Hr1G017260.1	Barley	plastid	21.1	20.19

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A287KN69	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G031720	EnsemblPlants:HORVU3Hr1G031720.2	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF213
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B471723	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:158835036..158836698

Molecular Weight (calculated)

53682.7 Da

IEP (calculated)

7.466

GRAVY (calculated)

-0.172

Length

507 amino acids

Sequence
(BLAST)

001: MDFGRRKSFS FFEEDRKARP ATAQTPVHHY ARGGGGGGGG GGGRSPAREA AEPARMSMSS VPVAELPGMM GVGGVGGGCS PWVQSPLHSR LRFPPSPAAI
101: YHCLAALHRL DGDVHALAVA RGVLFTASDS GRVRAWAAPG CFNRGYLDVG RGRVPALAAC GGTLVTSHSR DHHVRVWTVC AAAVCDHIRA KKAATLPAKG
201: GLLSFAKKRP HHHRDTVSCL VLHAVAGLLY TASHDHTVKA WKLSDGSCVD SFVAHDGPIN AMLVNEADGC IFTGSADGTV KMWRRVYGGT AHALIIVLRS
301: ELSPVNALTI CHAASGTTRR CFLYAGSSDG YVNIWEKEAS AGRPVHVGFL KGHRLAVFCL ASGCGGRVVV SGSEDATMRV WRREGKGGES HTCLAVIEGH
401: RGPVRCLAVG GGEAGEVEGS MVVYSAGLDK SVKVWRIRVV GKEEEDDEDD EDDDGEEEVE DIVAAGKGDV DAARDEVEVE EEQVVSLGPT PVLSPVWVEK
501: RRHTSRG

Best Arabidopsis Sequence Match ( AT1G47610.1 )
(BLAST)

001: MPRSDLTRGY SDGDSLVGEI VREEGHIYSL AATNDLLYTG SDNNYIRVWK NLNEFSGFKS NSGLVKAIVI SREAKVFTGH QDGKIRVWKT SSKNPRVYTR
101: AGSLPALKDV LKSSVKPSNY VEVRRCRTAL WIKHSDAVSC LSLAEDQGLL YSASWDRTVK VWRIHDLKCI ESIKAHDDAV NSVTTAESLV FTGSADGTVK
201: VWKREIRGKR TAHSLFQTLL KQESAVTALV TSHMAVYSGS SDGAVNFWEM GDKKLLKHCE VFKKHRLAVL CIAAAGKLLF SGAADKKICV WRREGKVHTC
301: VSVLTGHTGP VKCLAVVEPS GGEEEDGGDG RLVLYSGSLD KSVKVWRVPR H

Arabidopsis Description

F16N3.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9SX94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.