Factsheet for HORVU7Hr1G039810.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G100800.1	Wheat	cytosol	91.67	91.19
TraesCS7D01G196700.1	Wheat	cytosol	92.19	71.23
TraesCS7A01G195200.1	Wheat	cytosol	91.67	70.68
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	67.71	65.16
GSMUA_Achr6P36100_001	Banana	cytosol	52.34	51.15
CDY14665	Canola	plastid	46.35	43.73
GSMUA_Achr7P19910_001	Banana	cytosol	50.0	43.64
Bra024637.1-P	Field mustard	plastid	46.35	43.63
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	46.09	43.6
CDY16242	Canola	plastid	46.35	43.52
KRH57017	Soybean	plastid	44.53	43.4
AT1G24130.1	Thale cress	cytosol, plastid	46.09	42.65
KRH03365	Soybean	nucleus, plastid	44.01	41.63
VIT_01s0026g00880.t01	Wine grape	cytosol	45.57	40.98
CDY21432	Canola	cytosol, nucleus, plastid	41.41	40.98
KRH63468	Soybean	plastid	44.53	40.91
CDY70872	Canola	nucleus	40.62	40.52
Bra000611.1-P	Field mustard	nucleus	40.89	40.36
KRH54449	Soybean	plastid	44.01	40.14
PGSC0003DMT400062862	Potato	cytosol	41.15	40.1
AT5G50120.1	Thale cress	nucleus	40.36	39.95
Solyc05g006340.2.1	Tomato	cytosol	42.45	39.28
PGSC0003DMT400004842	Potato	plastid	43.49	38.75
KRH74694	Soybean	nucleus	43.49	38.57
Solyc04g005020.2.1	Tomato	plastid	42.97	38.46
PGSC0003DMT400040333	Potato	cytosol	42.45	37.82
KRH69465	Soybean	nucleus	42.97	37.59
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	39.58	33.85
Solyc03g113850.1.1	Tomato	cytosol, plastid	41.67	33.76
HORVU5Hr1G093830.1	Barley	cytosol	35.94	28.81
HORVU3Hr1G106030.1	Barley	plastid	32.03	28.21
HORVU4Hr1G012000.11	Barley	plastid	33.85	27.08
HORVU3Hr1G031720.2	Barley	cytosol	29.95	22.68
HORVU5Hr1G017260.1	Barley	plastid	24.22	17.55

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU7Hr1G039810
EnsemblPlants:HORVU7Hr1G039810.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M0Y7L4	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF321	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI000295DEDD	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:106246048..106248445

Molecular Weight (calculated)

40762.3 Da

IEP (calculated)

8.143

GRAVY (calculated)

-0.065

Length

384 amino acids

Sequence
(BLAST)

001: MSLNSEEGLM CQAISHSSQS SAPSLSSCHY QCVSTLRGHS SYVSGLAVDG NSLYVASSDG HIRMWPLDMG STTVQQQGSV VAVTDSSIKC LMATSDGLLS
101: AHQDGKIRVW QPAGRRKDGS SHLALHGVLP TTADCLRTFL FPKNYVDVRR HRSRTWVHHV DAVTALALSP DGGYMYSVSW DRSLKVWRLP SLRCVESIAP
201: AHNDAINAVA VSSDGHIYTG SADRTIKAWR RYPGQKRLAL VGTMERHRSA VNALAMGVGG LVLYSGSCDQ SVVVWEGFDA GGAAVTSTLR GHAKAVLCLA
301: AAGDVACSGS ADRTVRVWRR GAEGGYSCSA VLDGHGAAVK SLALVLMGGD HDSEREESPR GGCSALVCSG SLDCDVKIWR VSLT

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.