Factsheet for HORVU3Hr1G106030.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G485100.1	Wheat	plastid	88.3	92.55
TraesCS3D01G480400.1	Wheat	plastid	90.83	92.52
TraesCS3B01G532800.1	Wheat	cytosol, plastid	91.51	92.36
Os01t0946100-02	Rice	cytosol, plastid	68.81	69.61
KXG34097	Sorghum	plastid	69.72	69.41
Zm00001d042132_P001	Maize	plastid	61.47	66.67
GSMUA_Achr11P...	Banana	cytosol	46.56	54.57
AT3G51930.1	Thale cress	cytosol, plastid	50.46	53.01
KRH39863	Soybean	cytosol, plastid	50.46	52.88
VIT_13s0019g01680.t01	Wine grape	plastid	47.71	52.39
CDY23176	Canola	cytosol, plastid	50.69	52.12
PGSC0003DMT400017340	Potato	plastid	49.08	52.07
CDX78047	Canola	plastid	49.77	51.91
Bra033466.1-P	Field mustard	cytosol, plastid	50.23	51.65
Bra006883.1-P	Field mustard	plastid	49.54	50.94
CDX73675	Canola	cytosol, mitochondrion, plastid	49.54	50.94
Solyc01g068250.2.1	Tomato	cytosol	48.39	50.72
HORVU4Hr1G012000.11	Barley	plastid	36.01	32.71
HORVU7Hr1G039810.1	Barley	plastid	28.21	32.03
HORVU5Hr1G093830.1	Barley	cytosol	31.42	28.6
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	27.52	26.73
HORVU3Hr1G031720.2	Barley	cytosol	26.83	23.08
HORVU5Hr1G017260.1	Barley	plastid	26.61	21.89

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A287MK59	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU3Hr1G106030	EnsemblPlants:HORVU3Hr1G106030.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF223	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000B4841EC	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:670355396..670357153

Molecular Weight (calculated)

45836.5 Da

IEP (calculated)

9.267

GRAVY (calculated)

-0.070

Length

436 amino acids

Sequence
(BLAST)

001: MAIMPPEQQR AAMSEPLLPY PASLPSSASS SFSASASFPS FSASSSPSDA APVPIPARGE PLAACKPLAV LRDAHSRGGG SVSCLSLCGE FLLSASTGSD
101: IVAWQLPDLR LFARFGGHGC GEGAVKALAA AGGRVFSAHQ DGRVRVWRVS RSSENAFKLV AALPTTRDYL GRVFRQASYV QAGPRRGRRR GRRLWIEHAD
201: SISCLAVAAQ DGVVYSGSWD RTLKVWRMSD LRCLESVRAH DDAINAVAAD CGVVYSASAD GRVKAWERGK VGAGTHTLLA VLVARDGVSW NAVAASGDAG
301: AAGRRVYAAG SDGHVLGWDR HGGRWNLACN VKAHAMAVLC MCVAGDLVCT GSADKTIGLW RRQPCGGLAK VGAVGGHEGP VKCIQASLCR ASNGYMVYSG
401: GLDKSIRVWW VPNADNGDER PRETGAKDHR PCVLLG

Best Arabidopsis Sequence Match ( AT3G51930.1 )
(BLAST)

001: MVRSIQEGVL MSSSSSSTTS NSNDSDGSLS PSASTKSFVL NTLRPPITGA YKPLAVLSAH VGSVSSLALC GEFLLSASQG KDIIVWQQPD LKIFAKFGQG
101: DGSVKALVSV GSKVFTAHQD SRIRVWKVSR RNSENAFRLV DTLPTTKDYL GKFMKQSNYV QTRRNHKRLW IEHADSISCL AVHAGIIYSG SWDKTLKVWR
201: LSDLKCLESI KAHDDAINGL VAGDGRVYSA SADGKVKIWG KEKRKQIEST SSSSSSLHVL KATLEGRAEV SVNSVVVSGD GNWVYGGGSD GFVIGWEKKE
301: KEGDFEEWRL GFETRGHNMA VLCMCVVGEM VCSGSADKSI GLWRREVTGM LCKFGVIHGH EGPVKCLQAS PNNVGAGFML YSGGLDKSLR VWWVPKQDNL
401: EEKKSSFKTL LTQKE

Arabidopsis Description

At3g51930 [Source:UniProtKB/TrEMBL;Acc:Q9SV11]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.