Factsheet for AT3G51930.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23176	Canola	cytosol, plastid	90.36	88.44
Bra033466.1-P	Field mustard	cytosol, plastid	89.88	87.97
Bra006883.1-P	Field mustard	plastid	89.4	87.5
CDX78047	Canola	plastid	87.95	87.32
CDX73675	Canola	cytosol, mitochondrion, plastid	88.92	87.03
VIT_13s0019g01680.t01	Wine grape	plastid	62.89	65.74
PGSC0003DMT400017340	Potato	plastid	65.06	65.69
Solyc01g068250.2.1	Tomato	cytosol	65.54	65.38
KRH39863	Soybean	cytosol, plastid	64.82	64.66
GSMUA_Achr11P...	Banana	cytosol	54.7	61.02
Os01t0946100-02	Rice	cytosol, plastid	54.7	52.67
TraesCS3A01G485100.1	Wheat	plastid	52.29	52.16
HORVU3Hr1G106030.1	Barley	plastid	53.01	50.46
KXG34097	Sorghum	plastid	53.25	50.46
TraesCS3D01G480400.1	Wheat	plastid	51.81	50.23
TraesCS3B01G532800.1	Wheat	cytosol, plastid	52.29	50.23
Zm00001d042132_P001	Maize	plastid	46.02	47.51
AT1G47610.1	Thale cress	cytosol	33.25	39.32
AT1G24130.1	Thale cress	cytosol, plastid	34.22	34.22
AT5G50120.1	Thale cress	nucleus	31.33	33.51
AT1G49450.1	Thale cress	nucleus	37.11	32.7
AT1G24530.1	Thale cress	cytosol, plastid	32.77	32.54
AT2G26490.1	Thale cress	cytosol	36.39	32.47
AT3G18950.1	Thale cress	cytosol, nucleus, plastid	35.9	31.5
AT3G50390.1	Thale cress	cytosol	34.7	30.7
AT4G34380.1	Thale cress	cytosol	33.25	27.88

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:824356	ProteinID:AEE78864.1	EMBL:AK228303	ArrayExpress:AT3G51930
EnsemblPlantsGene:AT3G51930	RefSeq:AT3G51930	TAIR:AT3G51930	RefSeq:AT3G51930-TAIR-G	EnsemblPlants:AT3G51930.1	TAIR:AT3G51930.1
EMBL:BT008335	ProteinID:CAB41313.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	RefSeq:NP_190761.1	PFAM:PF00400	PO:PO:0000293	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF223	UniProt:Q9SV11	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0000048838	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

At3g51930 [Source:UniProtKB/TrEMBL;Acc:Q9SV11]

Coordinates

chr3:+:19271347..19273064

Molecular Weight (calculated)

45280.0 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.257

Length

415 amino acids

Sequence
(BLAST)

001: MVRSIQEGVL MSSSSSSTTS NSNDSDGSLS PSASTKSFVL NTLRPPITGA YKPLAVLSAH VGSVSSLALC GEFLLSASQG KDIIVWQQPD LKIFAKFGQG
101: DGSVKALVSV GSKVFTAHQD SRIRVWKVSR RNSENAFRLV DTLPTTKDYL GKFMKQSNYV QTRRNHKRLW IEHADSISCL AVHAGIIYSG SWDKTLKVWR
201: LSDLKCLESI KAHDDAINGL VAGDGRVYSA SADGKVKIWG KEKRKQIEST SSSSSSLHVL KATLEGRAEV SVNSVVVSGD GNWVYGGGSD GFVIGWEKKE
301: KEGDFEEWRL GFETRGHNMA VLCMCVVGEM VCSGSADKSI GLWRREVTGM LCKFGVIHGH EGPVKCLQAS PNNVGAGFML YSGGLDKSLR VWWVPKQDNL
401: EEKKSSFKTL LTQKE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.