Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76704 | Canola | cytosol | 94.62 | 94.62 |
| Bra007751.1-P | Field mustard | nucleus | 91.18 | 94.22 |
| CDY11480 | Canola | cytosol | 93.98 | 93.98 |
| CDY48182 | Canola | nucleus | 88.17 | 91.31 |
| CDX77053 | Canola | cytosol | 88.17 | 91.31 |
| Bra034310.1-P | Field mustard | nucleus | 88.17 | 91.31 |
| VIT_18s0001g11600.t01 | Wine grape | nucleus | 68.82 | 70.18 |
| AT1G47610.1 | Thale cress | cytosol | 49.68 | 65.81 |
| PGSC0003DMT400008621 | Potato | mitochondrion | 60.0 | 64.88 |
| PGSC0003DMT400016680 | Potato | cytosol | 61.51 | 64.13 |
| Solyc04g079700.2.1 | Tomato | cytosol | 61.08 | 63.96 |
| Solyc12g088980.1.1 | Tomato | cytosol | 55.48 | 63.55 |
| PGSC0003DMT400039941 | Potato | cytosol | 55.48 | 63.39 |
| Solyc07g025140.2.1 | Tomato | cytosol | 60.22 | 63.35 |
| KRH05757 | Soybean | nucleus | 63.44 | 63.3 |
| KRH15278 | Soybean | cytosol | 49.03 | 62.64 |
| TraesCS5B01G382700.1 | Wheat | cytosol | 55.48 | 54.32 |
| TraesCS5D01G389000.1 | Wheat | cytosol | 55.48 | 54.32 |
| TraesCS5A01G379200.1 | Wheat | cytosol | 55.7 | 54.3 |
| GSMUA_Achr3P30740_001 | Banana | cytosol | 40.86 | 54.29 |
| HORVU5Hr1G093830.1 | Barley | cytosol | 55.7 | 54.07 |
| Os03t0738700-01 | Rice | plasma membrane | 56.77 | 53.99 |
| EER93490 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 55.91 | 53.5 |
| AT4G34380.1 | Thale cress | cytosol | 56.13 | 52.73 |
| AT1G49450.1 | Thale cress | nucleus | 51.18 | 50.53 |
| AT3G18950.1 | Thale cress | cytosol, nucleus, plastid | 50.75 | 49.89 |
| AT3G50390.1 | Thale cress | cytosol | 49.46 | 49.04 |
| GSMUA_Achr4P10690_001 | Banana | cytosol, endoplasmic reticulum, plastid | 39.14 | 48.79 |
| GSMUA_Achr6P20880_001 | Banana | cytosol | 40.0 | 47.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.85 | 44.22 |
| AT1G24130.1 | Thale cress | cytosol, plastid | 35.48 | 39.76 |
| GSMUA_Achr4P07470_001 | Banana | endoplasmic reticulum, plasma membrane | 41.72 | 38.96 |
| AT5G50120.1 | Thale cress | nucleus | 30.75 | 36.86 |
| AT3G51930.1 | Thale cress | cytosol, plastid | 32.47 | 36.39 |
| AT1G24530.1 | Thale cress | cytosol, plastid | 30.75 | 34.21 |
| GSMUA_Achr4P03080_001 | Banana | mitochondrion, nucleus, peroxisome, plasma membrane | 44.09 | 32.03 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EntrezGene:817190 | ProteinID:AAC14498.1 | ProteinID:AEC07844.1 | ArrayExpress:AT2G26490 |
| EnsemblPlantsGene:AT2G26490 | RefSeq:AT2G26490 | TAIR:AT2G26490 | RefSeq:AT2G26490-TAIR-G | EnsemblPlants:AT2G26490.1 | TAIR:AT2G26490.1 |
| EMBL:BT015086 | EMBL:BT015900 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009846 | GO:GO:0009856 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | RefSeq:NP_180217.1 | UniProt:O48716 | PFAM:PF00400 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22844 |
| PANTHER:PTHR22844:SF128 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI00000AAE85 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
JGBProtein JINGUBANG [Source:UniProtKB/Swiss-Prot;Acc:O48716]
Coordinates
chr2:+:11267857..11269750
Molecular Weight (calculated)
51440.0 Da
IEP (calculated)
8.982
GRAVY (calculated)
-0.413
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTEADSIPR AKYANMMHSD PNLSSTMTQQ TEEEYGIRNS SASAVGTGMY DRMSCEGSPM MMSPWNQATP FTQTQWSTVE ENLPQNGLIG SLVREEGHIY
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.