Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016680 | Potato | cytosol | 93.89 | 93.05 |
| Solyc12g088980.1.1 | Tomato | cytosol | 66.52 | 72.41 |
| Solyc04g079700.2.1 | Tomato | cytosol | 70.14 | 69.82 |
| VIT_18s0001g11600.t01 | Wine grape | nucleus | 66.97 | 64.91 |
| Bra034310.1-P | Field mustard | nucleus | 63.35 | 62.36 |
| CDY48182 | Canola | nucleus | 63.35 | 62.36 |
| Bra007751.1-P | Field mustard | nucleus | 62.9 | 61.78 |
| CDX77053 | Canola | cytosol | 62.67 | 61.69 |
| CDX76704 | Canola | cytosol | 64.25 | 61.08 |
| CDY11480 | Canola | cytosol | 64.25 | 61.08 |
| KRH15278 | Soybean | cytosol | 49.77 | 60.44 |
| AT2G26490.1 | Thale cress | cytosol | 63.35 | 60.22 |
| KRH05757 | Soybean | nucleus | 59.73 | 56.65 |
| Solyc03g044830.2.1 | Tomato | nucleus | 54.98 | 53.17 |
| GSMUA_Achr3P30740_001 | Banana | cytosol | 42.08 | 53.14 |
| Solyc02g090150.1.1 | Tomato | nucleus | 53.39 | 52.21 |
| Solyc01g109120.2.1 | Tomato | cytosol, mitochondrion | 54.52 | 51.83 |
| Os03t0738700-01 | Rice | plasma membrane | 57.24 | 51.74 |
| TraesCS5D01G389000.1 | Wheat | cytosol | 55.43 | 51.58 |
| TraesCS5B01G382700.1 | Wheat | cytosol | 55.43 | 51.58 |
| TraesCS5A01G379200.1 | Wheat | cytosol | 55.43 | 51.36 |
| HORVU5Hr1G093830.1 | Barley | cytosol | 55.43 | 51.15 |
| EER93490 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 55.88 | 50.82 |
| GSMUA_Achr6P20880_001 | Banana | cytosol | 40.5 | 45.66 |
| GSMUA_Achr4P10690_001 | Banana | cytosol, endoplasmic reticulum, plastid | 38.46 | 45.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.91 | 43.22 |
| GSMUA_Achr4P07470_001 | Banana | endoplasmic reticulum, plasma membrane | 41.63 | 36.95 |
| Solyc05g006340.2.1 | Tomato | cytosol | 33.26 | 35.42 |
| Solyc04g005020.2.1 | Tomato | plastid | 32.81 | 33.8 |
| Solyc01g068250.2.1 | Tomato | cytosol | 31.67 | 33.65 |
| Solyc05g013880.1.1 | Tomato | cytosol, plastid | 30.54 | 31.76 |
| Solyc03g111780.1.1 | Tomato | cytosol | 28.05 | 30.92 |
| GSMUA_Achr4P03080_001 | Banana | mitochondrion, nucleus, peroxisome, plasma membrane | 42.99 | 29.69 |
| Solyc03g113850.1.1 | Tomato | cytosol, plastid | 30.54 | 28.48 |
| Solyc12g044320.1.1 | Tomato | cytosol, plastid | 28.28 | 27.59 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K4CD65 | PFAM:PF00400 | PRINTS:PR00320 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22844 | PANTHER:PTHR22844:SF128 | SMART:SM00320 | SUPFAM:SSF50978 |
| EnsemblPlantsGene:Solyc07g025140.2 | EnsemblPlants:Solyc07g025140.2.1 | UniParc:UPI000276ABF6 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:25368460..25370048
Molecular Weight (calculated)
48646.1 Da
IEP (calculated)
8.700
GRAVY (calculated)
-0.429
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVDTSHLPP KLGNTVHSDP NISSSHIDDD NNNFNARHSS FSAYEANRLS GEGSPMMMSP WNQGSPWSKF DEGNNNSQNN NNNNINGLIG SLVREEGHIY
101: SLATKNDLLY TGSDSKNIRV WKNLKEFAAF KSNSGLVKAI IISGEKIFTG HQDGKVRVWK IQTKNPGTYK RAGTLPSFFD IFKASIKPSN YVEVKRNRSG
201: LWIKHVDAIS CLSMDQTRGL LYSASWDRTF KVWNVDNSKC IESVKAHDDA VNSVVTSVEG IVYTGSADGT VKVWQRENTG KHPKHVFVQT LLNQECAVTA
301: LVVSKSGSVV YCGSSDGVVN FWEREKQLSH GGVLKGHKLA ILCLAAAGNL LLSGSADKTI CVWRRDKKSI HTLLSVLSGH NGPVKCLAVE EDKESTETDQ
401: KWVVYSGSLD KSVKVWTVSD KAPIITHNNN SDSFCTSSDS NV
101: SLATKNDLLY TGSDSKNIRV WKNLKEFAAF KSNSGLVKAI IISGEKIFTG HQDGKVRVWK IQTKNPGTYK RAGTLPSFFD IFKASIKPSN YVEVKRNRSG
201: LWIKHVDAIS CLSMDQTRGL LYSASWDRTF KVWNVDNSKC IESVKAHDDA VNSVVTSVEG IVYTGSADGT VKVWQRENTG KHPKHVFVQT LLNQECAVTA
301: LVVSKSGSVV YCGSSDGVVN FWEREKQLSH GGVLKGHKLA ILCLAAAGNL LLSGSADKTI CVWRRDKKSI HTLLSVLSGH NGPVKCLAVE EDKESTETDQ
401: KWVVYSGSLD KSVKVWTVSD KAPIITHNNN SDSFCTSSDS NV
001: MFTEADSIPR AKYANMMHSD PNLSSTMTQQ TEEEYGIRNS SASAVGTGMY DRMSCEGSPM MMSPWNQATP FTQTQWSTVE ENLPQNGLIG SLVREEGHIY
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH
Arabidopsis Description
JGBProtein JINGUBANG [Source:UniProtKB/Swiss-Prot;Acc:O48716]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.