Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400043704 | Potato | plastid | 95.29 | 92.89 |
| Bra032795.1-P | Field mustard | cytosol | 44.94 | 61.81 |
| VIT_01s0137g00360.t01 | Wine grape | cytosol | 57.88 | 56.94 |
| CDY51591 | Canola | cytosol, mitochondrion | 54.12 | 55.02 |
| KRH43090 | Soybean | plastid | 55.76 | 54.99 |
| Bra012504.1-P | Field mustard | cytosol, mitochondrion | 53.88 | 54.78 |
| CDY03879 | Canola | cytosol, mitochondrion | 53.65 | 54.55 |
| CDY24427 | Canola | plastid | 54.12 | 54.5 |
| CDX84954 | Canola | plastid | 53.65 | 54.03 |
| AT1G24530.1 | Thale cress | cytosol, plastid | 52.94 | 53.83 |
| CDY36134 | Canola | plastid | 53.41 | 53.79 |
| Bra010967.1-P | Field mustard | cytosol, plastid | 53.18 | 53.55 |
| CDY27587 | Canola | plastid | 53.18 | 51.95 |
| GSMUA_Achr9P07610_001 | Banana | nucleus | 42.12 | 43.98 |
| Solyc03g111780.1.1 | Tomato | cytosol | 41.18 | 43.64 |
| Solyc05g006340.2.1 | Tomato | cytosol | 42.35 | 43.37 |
| GSMUA_Achr3P17140_001 | Banana | cytosol | 45.18 | 43.24 |
| Solyc04g005020.2.1 | Tomato | plastid | 40.24 | 39.86 |
| Solyc03g113850.1.1 | Tomato | cytosol, plastid | 39.76 | 35.65 |
| GSMUA_Achr8P28630_001 | Banana | cytosol | 43.06 | 35.6 |
| TraesCS2D01G338900.1 | Wheat | plastid | 36.71 | 35.29 |
| TraesCS2A01G324000.1 | Wheat | plastid | 36.71 | 35.21 |
| HORVU2Hr1G083090.1 | Barley | mitochondrion, plastid | 36.94 | 34.97 |
| Zm00001d003272_P001 | Maize | cytosol, plastid | 36.94 | 34.81 |
| Zm00001d025699_P001 | Maize | plastid | 36.94 | 34.73 |
| TraesCS2B01G358100.1 | Wheat | plastid | 36.24 | 34.45 |
| KXG26570 | Sorghum | cytosol, plastid | 37.65 | 33.97 |
| Solyc12g088980.1.1 | Tomato | cytosol | 29.88 | 31.28 |
| Solyc01g068250.2.1 | Tomato | cytosol | 30.12 | 30.77 |
| Solyc07g025140.2.1 | Tomato | cytosol | 31.76 | 30.54 |
| Os04t0481600-00 | Rice | cytosol | 36.94 | 30.37 |
| Solyc04g079700.2.1 | Tomato | cytosol | 31.53 | 30.18 |
| Solyc01g109120.2.1 | Tomato | cytosol, mitochondrion | 32.0 | 29.25 |
| Solyc02g090150.1.1 | Tomato | nucleus | 30.35 | 28.54 |
| Solyc03g044830.2.1 | Tomato | nucleus | 30.12 | 28.01 |
| Solyc12g044320.1.1 | Tomato | cytosol, plastid | 28.0 | 26.27 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | UniProt:K4BYA9 | PFAM:PF00400 | PRINTS:PR00320 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR22844 | PANTHER:PTHR22844:SF199 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:Solyc05g013880.1 | EnsemblPlants:Solyc05g013880.1.1 |
| UniParc:UPI00027660A9 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr5:-:7319451..7320728
Molecular Weight (calculated)
46419.4 Da
IEP (calculated)
9.310
GRAVY (calculated)
-0.125
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFRSWISPF SSANAAADHP IPPPKGMFPD DASNFSDLPS STASPSLVSQ ETNSLSSLQS NLSLLTLPSV PSLQNLSPAT LNLAISARCV NSLNPRNAHV
101: TFLAMHNNLL YAASSNEINV FELINFTLID TFNNKDPSSG SAKSVSFLDG KIFTAHQDCK IRVWKLTPNK QHKLIATLPT LEDRLRRFVF PSSYTNVRRH
201: KKKMWIEHHD AVSGLAVNEN LMCSVSWDRC LKIWGGSKLR CIESIKAHDD AINAVVVGKD GTIFTGSADK RIRVWGKPYA EKKGKIGLIA TLEKHKSAVN
301: ALALSSDESV LFSGACDRSI LVWEREDSAN YMVVTGALRG HTKAILCLIN VSDLLFSGSA DRTVRIWTRG NQGQFCCLTV LDGHRTPVRS LVATPAESGG
401: VKLFSGSFDG EIKEWQIVVS SSSGS
101: TFLAMHNNLL YAASSNEINV FELINFTLID TFNNKDPSSG SAKSVSFLDG KIFTAHQDCK IRVWKLTPNK QHKLIATLPT LEDRLRRFVF PSSYTNVRRH
201: KKKMWIEHHD AVSGLAVNEN LMCSVSWDRC LKIWGGSKLR CIESIKAHDD AINAVVVGKD GTIFTGSADK RIRVWGKPYA EKKGKIGLIA TLEKHKSAVN
301: ALALSSDESV LFSGACDRSI LVWEREDSAN YMVVTGALRG HTKAILCLIN VSDLLFSGSA DRTVRIWTRG NQGQFCCLTV LDGHRTPVRS LVATPAESGG
401: VKLFSGSFDG EIKEWQIVVS SSSGS
001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ
Arabidopsis Description
F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.