Factsheet for TraesCS2B01G358100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G324000.1	Wheat	plastid	94.63	95.49
TraesCS2D01G338900.1	Wheat	plastid	94.41	95.48
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	92.39	91.98
Zm00001d025699_P001	Maize	plastid	74.05	73.23
Zm00001d003272_P001	Maize	cytosol, plastid	72.04	71.4
KXG26570	Sorghum	cytosol, plastid	74.72	70.91
Os04t0481600-00	Rice	cytosol	78.08	67.5
Bra032795.1-P	Field mustard	cytosol	32.44	46.93
GSMUA_Achr9P07610_001	Banana	nucleus	42.28	46.44
GSMUA_Achr3P17140_001	Banana	cytosol	43.4	43.69
TraesCS7B01G100800.1	Wheat	cytosol	34.9	40.41
KRH57169	Soybean	cytosol, plasma membrane	29.98	39.3
CDY24427	Canola	plastid	36.91	39.1
CDY36134	Canola	plastid	36.69	38.86
CDY51591	Canola	cytosol, mitochondrion	36.24	38.76
KRH43090	Soybean	plastid	37.36	38.75
Bra010967.1-P	Field mustard	cytosol, plastid	36.47	38.63
Bra012504.1-P	Field mustard	cytosol, mitochondrion	36.02	38.52
CDX84954	Canola	plastid	36.24	38.39
CDY03879	Canola	cytosol, mitochondrion	35.79	38.28
AT1G24530.1	Thale cress	cytosol, plastid	35.57	38.04
GSMUA_Achr8P28630_001	Banana	cytosol	42.95	37.35
VIT_01s0137g00360.t01	Wine grape	cytosol	35.79	37.04
CDY27587	Canola	plastid	36.02	37.01
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	32.44	36.25
Solyc05g013880.1.1	Tomato	cytosol, plastid	34.45	36.24
KRH03884	Soybean	cytosol	29.98	35.64
PGSC0003DMT400043704	Potato	plastid	34.23	35.09
Solyc03g111780.1.1	Tomato	cytosol	28.41	31.67
TraesCS5B01G068600.1	Wheat	cytosol	28.41	28.22
TraesCS3B01G532800.1	Wheat	cytosol, plastid	27.07	28.01
TraesCS5B01G382700.1	Wheat	cytosol	29.31	27.58
TraesCS4B01G072300.1	Wheat	plastid	28.41	26.85
TraesCS4B01G072200.1	Wheat	plastid	28.19	26.25
TraesCS4B01G072100.1	Wheat	plastid	28.19	25.98
TraesCS3B01G182500.1	Wheat	cytosol	23.27	20.59

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844
PANTHER:PTHR22844:SF199	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS2B01G358100	EnsemblPlants:TraesCS2B01G358100.1	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:510896756..510898099

Molecular Weight (calculated)

46273.5 Da

IEP (calculated)

9.612

GRAVY (calculated)

-0.022

Length

447 amino acids

Sequence
(BLAST)

001: MKLLPRLCMA TSSAAAADSD ASSNKLGSVA STSSSTVSTS SSAAAAAVSE ASSSTSLPSL SAATSNAACR AAAFAHVATL LPPPTAAAAA SAAAAVAVVD
101: GSHGFVVARP ASVALHDLCT LEPTSTSDPG HDTATAGSVK CVAHVHGGKA VTGHQDGRLR LWRVSSRAPA RIRLAAALPT VSDRLRRFPV PSNHVAVRRH
201: HRRLWIEHAD TVSGVAASTD GRLLFSVSWD KTLKVWAIPS LRCLQSLPAH DDAVNAVAVA PDGTVYTGSA DRRVRVWAPR PASDKTTKRQ SKKPVYYLVA
301: TLSRHTAAVN AVAVGCGGQV LYSGGNDRCV VVWEREDSAS HMVAIGALRG HRKAVLSIAC AGDGLVVSGS ADHTVRAWRR ETDGRGHTCV AVIDGHGSAV
401: RSVAVALVPG KKQLQGGDDD GEEEWRVCSA SLDGEVRVWS LRETTGL

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.