Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH57169 | Soybean | cytosol, plasma membrane | 48.75 | 57.18 |
VIT_01s0137g00360.t01 | Wine grape | cytosol | 59.75 | 55.32 |
KRH03884 | Soybean | cytosol | 48.0 | 51.06 |
Solyc03g111780.1.1 | Tomato | cytosol | 47.0 | 46.88 |
GSMUA_Achr9P07610_001 | Banana | nucleus | 45.0 | 44.23 |
GSMUA_Achr3P17140_001 | Banana | cytosol | 45.25 | 40.77 |
VIT_01s0026g00880.t01 | Wine grape | cytosol | 40.25 | 37.7 |
VIT_17s0000g07690.t01 | Wine grape | nucleus, plastid | 37.75 | 37.19 |
GSMUA_Achr8P28630_001 | Banana | cytosol | 43.0 | 33.46 |
TraesCS2D01G338900.1 | Wheat | plastid | 36.75 | 33.26 |
VIT_13s0019g01680.t01 | Wine grape | plastid | 32.5 | 32.75 |
TraesCS2A01G324000.1 | Wheat | plastid | 36.25 | 32.73 |
Zm00001d025699_P001 | Maize | plastid | 36.75 | 32.52 |
VIT_18s0001g11600.t01 | Wine grape | nucleus | 37.0 | 32.46 |
TraesCS2B01G358100.1 | Wheat | plastid | 36.25 | 32.44 |
HORVU2Hr1G083090.1 | Barley | mitochondrion, plastid | 36.0 | 32.07 |
KXG26570 | Sorghum | cytosol, plastid | 37.75 | 32.06 |
Zm00001d003272_P001 | Maize | cytosol, plastid | 35.75 | 31.71 |
VIT_03s0063g01790.t01 | Wine grape | cytosol | 34.75 | 31.24 |
VIT_07s0255g00110.t01 | Wine grape | nucleus | 36.0 | 28.92 |
Os04t0481600-00 | Rice | cytosol | 37.25 | 28.82 |
VIT_04s0008g03540.t01 | Wine grape | cytosol | 30.25 | 27.01 |
VIT_09s0002g04040.t01 | Wine grape | nucleus | 28.75 | 25.67 |
VIT_09s0002g04050.t01 | Wine grape | cytosol | 27.0 | 24.11 |
VIT_09s0002g04060.t01 | Wine grape | nucleus | 29.0 | 12.22 |
Protein Annotations
EntrezGene:100246752 | wikigene:100246752 | Gene3D:2.130.10.10 | MapMan:35.1 | ProteinID:CBI14905 | ProteinID:CBI14905.3 |
UniProt:D7SHE6 | EMBL:FN594950 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | EntrezGene:LOC100246752 | wikigene:LOC100246752 | PFAM:PF00400 |
PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR22844 | PANTHER:PTHR22844:SF324 |
SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI00019851AD | ArrayExpress:VIT_17s0000g09730 | EnsemblPlantsGene:VIT_17s0000g09730 | EnsemblPlants:VIT_17s0000g09730.t01 |
InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | RefSeq:XP_002276016 |
RefSeq:XP_002276016.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr17:-:11592928..11594130
Molecular Weight (calculated)
43915.9 Da
IEP (calculated)
7.870
GRAVY (calculated)
-0.191
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPSLLATA DSTLPEQILP TSDTSINSET PSTSTLSQET TSFTASLQSR SPESRNVVVS HLCVSSLRTL TPHISCLAVH EKFLYAASGE DIHVYDLTTH
101: THIDTFRNNK PTSGSVKSIA FHEGKIFTAH QDSKIRVWRI TASKRHRLIS TLPTVKDFLR RSILPKNYVR VRRHKKRLWI EHNDAVSGLA MAEGFMYSAS
201: WDKSFKIWRT SDLRCVESVK AHDDAVNAVA VSASGTVYTA SADGCIRVWE RTGEERTHTL ITTLEKHKST VNALALSGDG SSLFSGGCES WILVWEREES
301: ANHMAATQAL VGHTGPVLCL ITVNNMIISG SSDRTVRIWR PGVDGRYHCT LMLEGHVKPV KSLVAVSSGT SYDVVSICSG SLDGEIKVWE VSAAAFDAKS
101: THIDTFRNNK PTSGSVKSIA FHEGKIFTAH QDSKIRVWRI TASKRHRLIS TLPTVKDFLR RSILPKNYVR VRRHKKRLWI EHNDAVSGLA MAEGFMYSAS
201: WDKSFKIWRT SDLRCVESVK AHDDAVNAVA VSASGTVYTA SADGCIRVWE RTGEERTHTL ITTLEKHKST VNALALSGDG SSLFSGGCES WILVWEREES
301: ANHMAATQAL VGHTGPVLCL ITVNNMIISG SSDRTVRIWR PGVDGRYHCT LMLEGHVKPV KSLVAVSSGT SYDVVSICSG SLDGEIKVWE VSAAAFDAKS
001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ
Arabidopsis Description
F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.