CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003272_P001	Maize	cytosol, plastid	83.01	86.7
Zm00001d025699_P001	Maize	plastid	83.01	86.5
HORVU2Hr1G083090.1	Barley	mitochondrion, plastid	72.19	75.72
TraesCS2D01G338900.1	Wheat	plastid	70.91	75.57
TraesCS2A01G324000.1	Wheat	plastid	70.49	74.94
TraesCS2B01G358100.1	Wheat	plastid	70.91	74.72
Os04t0481600-00	Rice	cytosol	77.71	70.79
GSMUA_Achr9P07610_001	Banana	nucleus	42.04	48.65
Bra032795.1-P	Field mustard	cytosol	31.21	47.57
GSMUA_Achr3P17140_001	Banana	cytosol	43.74	46.4
KRH57169	Soybean	cytosol, plasma membrane	30.57	42.23
CDY51591	Canola	cytosol, mitochondrion	35.67	40.19
CDY03879	Canola	cytosol, mitochondrion	35.67	40.19
KRH43090	Soybean	plastid	36.73	40.14
Bra012504.1-P	Field mustard	cytosol, mitochondrion	35.46	39.95
GSMUA_Achr8P28630_001	Banana	cytosol	43.52	39.88
CDY24427	Canola	plastid	35.67	39.81
CDY36134	Canola	plastid	35.46	39.57
CDX84954	Canola	plastid	35.46	39.57
VIT_01s0137g00360.t01	Wine grape	cytosol	36.09	39.35
Bra010967.1-P	Field mustard	cytosol, plastid	35.24	39.34
EES07284	Sorghum	cytosol	36.31	39.22
AT1G24530.1	Thale cress	cytosol, plastid	34.39	38.76
CDY27587	Canola	plastid	35.24	38.16
VIT_17s0000g09730.t01	Wine grape	cytosol, plastid	32.06	37.75
Solyc05g013880.1.1	Tomato	cytosol, plastid	33.97	37.65
KRH03884	Soybean	cytosol	29.51	36.97
PGSC0003DMT400043704	Potato	plastid	33.76	36.47
Solyc03g111780.1.1	Tomato	cytosol	27.6	32.42
KXG34097	Sorghum	plastid	27.81	29.91
EER93490	Sorghum	cytosol, endoplasmic reticulum, nucleus	29.94	29.01
OQU91330	Sorghum	mitochondrion	29.72	28.23
OQU79483	Sorghum	cytosol, mitochondrion, nucleus	27.81	25.84
EES02188	Sorghum	cytosol	24.2	21.19

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A1B6PLN0	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KXG26570	ProteinID:KXG26570	ProteinID:KXG26570.1	PFAM:PF00400
PRINTS:PR00320	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF199	SMART:SM00320
EnsemblPlantsGene:SORBI_3006G123000	SUPFAM:SSF50978	UniParc:UPI00081AE318	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:48878215..48881650

Molecular Weight (calculated)

48134.6 Da

IEP (calculated)

10.009

GRAVY (calculated)

-0.035

Length

471 amino acids

Sequence
(BLAST)

001: MQLLPRLCMA TGTGTGTGDG DGDREGNGNS SKLGTAVSSS SSTVSTSSAA AAAVSEASSS STSLPSLPSL SSATSASLAA SFAHVTTLLP LSASSSAAVV
101: AAAAGDSLHG GLVVVARPAC VALHDLSTME ATSTSDAADA AAAAGSVKCV AHLHGIGGAA AVTGHQDGRL RVWRVSSRSP GRLRLAAALP TVSDRLRRFP
201: VPSNHVTVRR HHRRLWIEHA DAVSGVAASA DGRLLFSVSW DKTLKVWALP SLRCLQSLPA HDDAVNAVAV APDGTVYTAS ADKRVRVWAT RRPDNKPPPS
301: RRGARGGKKH HQYHLVATLS RHTAAVNAVA VGCGGQALYS GGNDRCVLVW EREDSASHMV AVGALRGHRR AVLSVACAPG GLVVSGSADQ TVRAWRRAAD
401: GRGYACVAVI DGLHDAAVRS VAAAPVPPVQ KRSRAGGDGV DGGGGDEEEW KVCSASFDGE VRVWSLRVSG L

Best Arabidopsis Sequence Match ( AT1G24530.1 )
(BLAST)

001: MRVISKLFDS DRRRIPKSPK HLDSGESATS SSSLSDVTTG SSSLHSSLSL QTLPSVPSLQ KIPSTTVTVS HSVTSSFKLR ERSLPVTCLA VNGGYLFAVS
101: GHEVSIYDRD MCAHLDTFNG QDPFSGTVKS VGFSGEKIFT AHQDGKIGVW KLTAKSGYKQ LTTLPTLNDR LRRFALPKNY VQVRRHKKRL WIEHADAVTA
201: LAVSDGFIYS VSWDKTLKIW RASDLRCKES IKAHDDAVNA IAVSTNGTVY TGSADRRIRV WAKPTGEKRH TLVATLEKHK SAVNALALND DGSVLFSGSC
301: DRSILVWERE DTSNYMAVRG ALRGHDKAIL SLFNVSDLLL SGSADRTVRI WRRGPDSSYS CLEVLSGHTK PVKSLAAVRE KELDDVVSII SGSLDGEVKC
401: WKVSVTKPDN SFYTNLVQ

Arabidopsis Description

F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.