Factsheet for TraesCS7B01G100800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G039810.1	Barley	plastid	91.19	91.67
TraesCS7D01G196700.1	Wheat	cytosol	93.26	72.43
TraesCS7A01G195200.1	Wheat	cytosol	93.26	72.29
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	67.36	65.16
GSMUA_Achr6P36100_001	Banana	cytosol	52.59	51.65
GSMUA_Achr7P19910_001	Banana	cytosol	50.78	44.55
KRH57017	Soybean	plastid	44.56	43.65
CDY14665	Canola	plastid	45.08	42.75
AT1G24130.1	Thale cress	cytosol, plastid	45.85	42.65
Bra024637.1-P	Field mustard	plastid	45.08	42.65
VIT_17s0000g07690.t01	Wine grape	nucleus, plastid	44.82	42.61
CDY16242	Canola	plastid	45.08	42.54
KRH63468	Soybean	plastid	44.3	40.91
KRH03365	Soybean	nucleus, plastid	43.01	40.89
KRH54449	Soybean	plastid	44.3	40.62
VIT_01s0026g00880.t01	Wine grape	cytosol	44.82	40.52
CDY21432	Canola	cytosol, nucleus, plastid	40.41	40.21
Bra000611.1-P	Field mustard	nucleus	39.9	39.59
CDY70872	Canola	nucleus	39.38	39.48
PGSC0003DMT400062862	Potato	cytosol	40.16	39.34
Solyc05g006340.2.1	Tomato	cytosol	42.23	39.28
AT5G50120.1	Thale cress	nucleus	39.38	39.18
PGSC0003DMT400004842	Potato	plastid	43.52	38.98
Solyc04g005020.2.1	Tomato	plastid	43.01	38.69
KRH74694	Soybean	nucleus	43.01	38.34
PGSC0003DMT400040333	Potato	cytosol	42.23	37.82
KRH69465	Soybean	nucleus	42.23	37.13
TraesCS2B01G358100.1	Wheat	plastid	40.41	34.9
Solyc03g113850.1.1	Tomato	cytosol, plastid	40.67	33.12
TraesCS5B01G382700.1	Wheat	cytosol	36.27	29.47
TraesCS5B01G068600.1	Wheat	cytosol	33.68	28.89
TraesCS4B01G072300.1	Wheat	plastid	33.94	27.7
TraesCS3B01G532800.1	Wheat	cytosol, plastid	30.83	27.55
TraesCS4B01G072200.1	Wheat	plastid	33.68	27.08
TraesCS4B01G072100.1	Wheat	plastid	33.42	26.6
TraesCS3B01G182500.1	Wheat	cytosol	29.27	22.38

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22844	PANTHER:PTHR22844:SF321	SMART:SM00320	SUPFAM:SSF50978	EnsemblPlantsGene:TraesCS7B01G100800	EnsemblPlants:TraesCS7B01G100800.1
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	TIGR:cd00200
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:115286344..115287504

Molecular Weight (calculated)

40989.6 Da

IEP (calculated)

8.223

GRAVY (calculated)

-0.073

Length

386 amino acids

Sequence
(BLAST)

001: MSLNSEEGLM CKDISHSSQS SAPSPAHPLS PCRYECVSTL RGHSSYVSGL AVDGNSLYVA SSDGHIRLWP LDMGSTTVQQ GGSVVAVTNS SIKCLMATSD
101: GLVSAHQDGK IRVWQHAVRR KGGSSHLALH GVLPTTADCL RTFLFPKNYV DVRRQTSRTW VHHVDAVTAL ALSPDGGYMY SVSWDRSLKV WRLPSLRCME
201: SIAPAHNDAI NAIAVSSDGH VYTGSADRTI KAWMRNPGQK RLALVGTMER HRSAVNALAM GVGGLVLYSG SCDRSVVVWE GFDAGGAAAT RTLRGHVEAV
301: LCLAAAGDVA CSGSADRTVR VWRRGAEGEY SCSAVLDGHG AAVKSLALVL TGGDRCSERE ESSRGGCSAL VCSGSLDCDV KIWRVT

Best Arabidopsis Sequence Match ( AT1G24130.1 )
(BLAST)

001: MGLLPCSCPL PCNETRSECE TKSTHHQSES STSSSLLSQP SLPLVPSLSF QHQSSSVDHH CLATLKDKSS YVSSLAVSDK LLYTGSSNSE IRVWPREPPF
101: SPEYSTGDDR NVVANGNGGV KSLVILGDKL ISAHQDHKIR VWKIIDESNR RGQKYKCVAT LPTMNDRFKT LFSSKSYVEV RRHKKCTWVH HVDAVSSLAL
201: SQDGSLLYSA SWDRSFKIWR TSDFKCLDSI EKAHDDAINA IVVSKDGFVY TGSADKKIKV WNKKDKKHSL VATLTKHLSA VNALAISEDG KVLYSGACDR
301: SILVWERLIN GDDEELHMSV VGALRGHRKA IMCLAVASDL VLSGSADKSL RVWRRGLMEK EGYSCLAVLE GHTKPVKSLA VSVSDSDSNS DYSCMVYSGS
401: LDLSLKVWNL RVSSI

Arabidopsis Description

F3I6.5 protein [Source:UniProtKB/TrEMBL;Acc:O48679]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.