Factsheet for Os03t0738700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93490	Sorghum	cytosol, endoplasmic reticulum, nucleus	88.34	88.89
TraesCS5D01G389000.1	Wheat	cytosol	85.28	87.79
HORVU5Hr1G093830.1	Barley	cytosol	85.89	87.68
TraesCS5A01G379200.1	Wheat	cytosol	85.28	87.42
TraesCS5B01G382700.1	Wheat	cytosol	84.87	87.37
GSMUA_Achr3P30740_001	Banana	cytosol	44.99	62.86
AT1G47610.1	Thale cress	cytosol	44.17	61.54
Bra015611.1-P	Field mustard	cytosol	45.6	61.43
CDY06729	Canola	cytosol	45.4	61.16
VIT_18s0001g11600.t01	Wine grape	nucleus	56.44	60.53
CDY70402	Canola	cytosol	44.58	60.22
GSMUA_Achr4P10690_001	Banana	cytosol, endoplasmic reticulum, plastid	45.4	59.52
PGSC0003DMT400008621	Potato	mitochondrion	51.74	58.84
CDY48182	Canola	nucleus	53.78	58.57
Bra034310.1-P	Field mustard	nucleus	53.78	58.57
CDX77053	Canola	cytosol	53.58	58.35
Solyc04g079700.2.1	Tomato	cytosol	52.76	58.11
Bra007751.1-P	Field mustard	nucleus	53.17	57.78
Solyc07g025140.2.1	Tomato	cytosol	51.74	57.24
PGSC0003DMT400016680	Potato	cytosol	52.15	57.17
AT2G26490.1	Thale cress	cytosol	53.99	56.77
CDY11480	Canola	cytosol	53.37	56.13
CDX76704	Canola	cytosol	53.37	56.13
KRH15278	Soybean	cytosol	41.72	56.04
PGSC0003DMT400039941	Potato	cytosol	46.63	56.02
Solyc12g088980.1.1	Tomato	cytosol	46.42	55.91
KRH05757	Soybean	nucleus	51.74	54.29
GSMUA_Achr4P07470_001	Banana	endoplasmic reticulum, plasma membrane	47.24	46.39
GSMUA_Achr4P03080_001	Banana	mitochondrion, nucleus, peroxisome, plasma membrane	49.08	37.5
Os12t0594000-00	Rice	cytosol, peroxisome, plastid	45.81	37.4
Os03t0625300-00	Rice	mitochondrion	39.06	36.38
Os06t0238700-00	Rice	cytosol, nucleus, peroxisome, plastid	28.22	34.59
Os02t0740900-01	Rice	plastid	28.43	34.15
Os01t0946100-02	Rice	cytosol, plastid	28.43	32.25
Os01t0232200-00	Rice	cytosol	29.86	27.81
Os04t0481600-00	Rice	cytosol	26.99	25.53

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:4334050	ProteinID:ABF98776.1	EMBL:AK111764	ProteinID:BAF13127.1
ProteinID:BAS86292.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	EnsemblPlantsGene:Os03g0738700	EnsemblPlants:Os03t0738700-01	PFAM:PF00400	PRINTS:PR00320
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR22844	PANTHER:PTHR22844:SF145	UniProt:Q10D64	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0000DB4B0A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
RefSeq:XP_015629812.1	SEG:seg	:	:	:	:

Description

OsWD40-89WD40 repeat-like domain containing protein. (Os03t0738700-01)

Coordinates

chr3:+:30319466..30321640

Molecular Weight (calculated)

52262.1 Da

IEP (calculated)

8.294

GRAVY (calculated)

-0.332

Length

489 amino acids

Sequence
(BLAST)

001: MRDSDGEGAG GGLPRSHPSN LPLPAPHSDP NLQFSGTDDD FSNRHSSSSA TGGASPGYYS DYPSSFSGEC SPYNMSPWNQ TMASPWSHHS DASMAGLGGA
101: PAMAPGTSLI GSLVREEGHI YSLAAKTDTL YTGSDSKNIR VWRKQKDSGG FKSSSGLVKA IVISGERIFT GHQDGKIRVW KVSPKNGLHK RVGSLPRLRD
201: FLRGSLNPSN YVEVRKNRTA LWIRHSDAVS CLSPTDSAQG LLYSGSWDRT FKVWRINDSK CLESVVAHDD NVNAIVAAFD GLVFTGSADG TVKVWKRELQ
301: GKGTKHVAVQ TLLKQEHAVN ALAVSAVAPV LYCGSSDGLV NFWEGERHLV HGGVLRGHKK AVFCLAAAGS LLLSGSADNT IYVWRRDGGV HSCLSVLTGH
401: TEPIRCLAIV EDNKDNAAVP VDAVDSSFAS GSSTRWIVYS GSLDKSIKVW RVAEDAPDAL LRGPGGGDAP QMFDRYPGDP FGASSSSFR

Best Arabidopsis Sequence Match ( AT2G26490.1 )
(BLAST)

001: MFTEADSIPR AKYANMMHSD PNLSSTMTQQ TEEEYGIRNS SASAVGTGMY DRMSCEGSPM MMSPWNQATP FTQTQWSTVE ENLPQNGLIG SLVREEGHIY
101: SLAATKDLLY TGSDSKNIRV WKNLKEFSAF KCNSGLVKAI VISGEKIFTG HQDGKIRVWK VSPKNQSLHK RSGTLPTLKD IFKASLKPRN YVEVKKHRTA
201: LWIKHADAVS CLSLNDEQGL LYSASWDRTI KVWRIADSKC LESIPAHDDA VNSVVSTTEA IVFSGSADGT VKAWKRDQQG KYTKHTLMQT LTKQESAVTA
301: LAVSKNGAAV YFGSSDGLVN FWEREKQLNY GGILKGHKLA VLCLEVAGSL VFSGSADKTI CVWKRDGNIH TCLSVLTGHT GPVKCLAVEA DREASERRDK
401: KWIVYSGSLD KSVKVWGVSE SFIDMNQMSM MQQQQQQHVI SHSEPFMSDG SFSSSAGGAS SHRRH

Arabidopsis Description

JGBProtein JINGUBANG [Source:UniProtKB/Swiss-Prot;Acc:O48716]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.